Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A1Q93096 SDHAP1-207ENST00000440850 2000 ntBASIC17.33■□□□□ 0.36
PTP4A1Q93096 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A1Q93096 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A1Q93096 AC124283.5-201ENST00000624661 1809 ntBASIC17.33■□□□□ 0.36
PTP4A1Q93096 AC104581.1-202ENST00000635932 2618 ntBASIC17.33■□□□□ 0.36
PTP4A1Q93096 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 DUSP5P2-201ENST00000426873 1033 ntBASIC17.32■□□□□ 0.36
PTP4A1Q93096 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 AL138781.1-201ENST00000566567 1274 ntBASIC17.32■□□□□ 0.36
PTP4A1Q93096 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
PTP4A1Q93096 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PTP4A1Q93096 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.31■□□□□ 0.36
PTP4A1Q93096 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 AC142086.2-201ENST00000569753 217 ntBASIC17.31■□□□□ 0.36
PTP4A1Q93096 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 AC006557.6-201ENST00000623071 864 ntBASIC17.31■□□□□ 0.36
PTP4A1Q93096 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 FP475955.4-201ENST00000623131 1990 ntBASIC17.31■□□□□ 0.36
PTP4A1Q93096 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTP4A1Q93096 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PTP4A1Q93096 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.3■□□□□ 0.36
PTP4A1Q93096 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTP4A1Q93096 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms