Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 AC104076.2-201ENST00000448912 469 ntBASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 AC116562.4-202ENST00000641738 218 ntBASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.04■□□□□ 0.8
SH3RF2Q8TEC5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.03■□□□□ 0.8
SH3RF2Q8TEC5 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 CCR12P-201ENST00000446203 998 ntBASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 DUX4L26-201ENST00000489078 1255 ntBASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SH3RF2Q8TEC5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.02■□□□□ 0.79
SH3RF2Q8TEC5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SH3RF2Q8TEC5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SH3RF2Q8TEC5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.02■□□□□ 0.79
SH3RF2Q8TEC5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SH3RF2Q8TEC5 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SH3RF2Q8TEC5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 SLC25A1P2-201ENST00000430693 912 ntBASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 TCF3P1-201ENST00000423021 1937 ntBASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 KRT8P41-201ENST00000533985 1514 ntBASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3RF2Q8TEC5 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3RF2Q8TEC5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms