Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 AC133681.1-201ENST00000465482 601 ntBASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 HLA-A-209ENST00000638375 975 ntBASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 AL161938.1-201ENST00000569833 2180 ntBASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH19Q8TAB3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 AL359736.2-201ENST00000621992 437 ntBASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH19Q8TAB3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 AL049812.1-201ENST00000432563 2267 ntBASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 KRT16P5-201ENST00000455284 522 ntBASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PCDH19Q8TAB3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 C1QBPP2-201ENST00000528754 825 ntBASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PCDH19Q8TAB3 TNXA-203ENST00000507684 2038 ntBASIC19.9■□□□□ 0.78
PCDH19Q8TAB3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms