Protein–RNA interactions for Protein: Q8NG48

LINS1, Protein Lines homolog 1, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1Q8NG48 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
LINS1Q8NG48 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
LINS1Q8NG48 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.47
LINS1Q8NG48 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LINS1Q8NG48 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
LINS1Q8NG48 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LINS1Q8NG48 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
LINS1Q8NG48 SLC25A1P2-201ENST00000430693 912 ntBASIC24.2■■□□□ 1.46
LINS1Q8NG48 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
LINS1Q8NG48 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
LINS1Q8NG48 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LINS1Q8NG48 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
LINS1Q8NG48 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
LINS1Q8NG48 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
LINS1Q8NG48 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
LINS1Q8NG48 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LINS1Q8NG48 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC24.19■■□□□ 1.46
LINS1Q8NG48 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
LINS1Q8NG48 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LINS1Q8NG48 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.19■■□□□ 1.46
LINS1Q8NG48 KRT18P21-201ENST00000515767 1272 ntBASIC24.19■■□□□ 1.46
LINS1Q8NG48 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC24.19■■□□□ 1.46
LINS1Q8NG48 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC24.19■■□□□ 1.46
LINS1Q8NG48 AL023803.3-201ENST00000615559 522 ntBASIC24.19■■□□□ 1.46
LINS1Q8NG48 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LINS1Q8NG48 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC24.19■■□□□ 1.46
LINS1Q8NG48 AC073130.3-201ENST00000624389 2278 ntBASIC24.19■■□□□ 1.46
LINS1Q8NG48 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LINS1Q8NG48 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.19■■□□□ 1.46
LINS1Q8NG48 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.18■■□□□ 1.46
LINS1Q8NG48 AC113347.1-201ENST00000413321 391 ntBASIC24.18■■□□□ 1.46
LINS1Q8NG48 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 SLC25A3P1-201ENST00000443844 931 ntBASIC24.18■■□□□ 1.46
LINS1Q8NG48 ECEL1P2-202ENST00000465689 757 ntBASIC24.18■■□□□ 1.46
LINS1Q8NG48 CA15P1-201ENST00000481698 905 ntBASIC24.18■■□□□ 1.46
LINS1Q8NG48 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 FAM87A-204ENST00000613235 858 ntBASIC24.18■■□□□ 1.46
LINS1Q8NG48 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.18■■□□□ 1.46
LINS1Q8NG48 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LINS1Q8NG48 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC24.17■■□□□ 1.46
LINS1Q8NG48 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.17■■□□□ 1.46
LINS1Q8NG48 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LINS1Q8NG48 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LINS1Q8NG48 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
LINS1Q8NG48 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LINS1Q8NG48 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
LINS1Q8NG48 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC24.17■■□□□ 1.46
LINS1Q8NG48 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LINS1Q8NG48 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.17■■□□□ 1.46
LINS1Q8NG48 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC24.17■■□□□ 1.46
LINS1Q8NG48 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LINS1Q8NG48 TP73-202ENST00000354437 2140 ntTSL 5 BASIC24.17■■□□□ 1.46
LINS1Q8NG48 AC092338.2-201ENST00000568827 1415 ntBASIC24.17■■□□□ 1.46
LINS1Q8NG48 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LINS1Q8NG48 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LINS1Q8NG48 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LINS1Q8NG48 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LINS1Q8NG48 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.16■■□□□ 1.46
LINS1Q8NG48 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LINS1Q8NG48 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.16■■□□□ 1.46
LINS1Q8NG48 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
LINS1Q8NG48 TSPY23P-201ENST00000440136 739 ntBASIC24.16■■□□□ 1.46
LINS1Q8NG48 AC128688.1-201ENST00000487626 519 ntBASIC24.16■■□□□ 1.46
LINS1Q8NG48 CLN6-221ENST00000637494 765 ntTSL 5 BASIC24.16■■□□□ 1.46
LINS1Q8NG48 AC116562.4-202ENST00000641738 218 ntBASIC24.16■■□□□ 1.46
LINS1Q8NG48 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.16■■□□□ 1.46
LINS1Q8NG48 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LINS1Q8NG48 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LINS1Q8NG48 AC073508.3-201ENST00000619697 1419 ntBASIC24.16■■□□□ 1.46
LINS1Q8NG48 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LINS1Q8NG48 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC24.16■■□□□ 1.46
LINS1Q8NG48 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LINS1Q8NG48 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms