Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 AC087499.1-201ENST00000418141 1075 ntBASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ARHGEF39Q8N4T4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 SLC25A24-204ENST00000569674 2357 ntBASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 AL390955.1-201ENST00000428694 934 ntBASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 FAM207BP-201ENST00000447172 505 ntBASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 AC012306.2-201ENST00000609350 630 ntBASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.24■□□□□ 0.51
ARHGEF39Q8N4T4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 MMP23A-201ENST00000234610 1017 ntBASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 MIR1238-201ENST00000408483 83 ntBASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 KRT8P11-201ENST00000409686 1436 ntBASIC18.23■□□□□ 0.51
ARHGEF39Q8N4T4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 AC097488.1-201ENST00000507834 756 ntBASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ARHGEF39Q8N4T4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 CYP2D8P-201ENST00000433633 1490 ntBASIC18.21■□□□□ 0.51
ARHGEF39Q8N4T4 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms