Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 AC010947.1-201ENST00000623454 693 ntBASIC17.91■□□□□ 0.46
BEST3Q8N1M1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 RCC2P6-201ENST00000526625 1557 ntBASIC17.91■□□□□ 0.46
BEST3Q8N1M1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BEST3Q8N1M1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 AC011298.2-201ENST00000617989 482 ntBASIC17.9■□□□□ 0.46
BEST3Q8N1M1 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BEST3Q8N1M1 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.89■□□□□ 0.46
BEST3Q8N1M1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
BEST3Q8N1M1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
BEST3Q8N1M1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.89■□□□□ 0.46
BEST3Q8N1M1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
BEST3Q8N1M1 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
BEST3Q8N1M1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 CRYGFP-201ENST00000418459 633 ntBASIC17.89■□□□□ 0.45
BEST3Q8N1M1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 AC097488.1-201ENST00000507834 756 ntBASIC17.89■□□□□ 0.45
BEST3Q8N1M1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 AC005363.2-201ENST00000618631 242 ntBASIC17.89■□□□□ 0.45
BEST3Q8N1M1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BEST3Q8N1M1 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 AC004951.3-201ENST00000418645 1148 ntBASIC17.88■□□□□ 0.45
BEST3Q8N1M1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 AC010331.1-201ENST00000611423 582 ntBASIC17.88■□□□□ 0.45
BEST3Q8N1M1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 AC130371.2-201ENST00000619443 611 ntBASIC17.88■□□□□ 0.45
BEST3Q8N1M1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
BEST3Q8N1M1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 AC009237.14-201ENST00000609975 1594 ntBASIC17.87■□□□□ 0.45
BEST3Q8N1M1 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
BEST3Q8N1M1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms