Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 TPM4P1-201ENST00000436100 807 ntBASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.24■□□□□ 0.51
COL27A1Q8IZC6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.23■□□□□ 0.51
COL27A1Q8IZC6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL27A1Q8IZC6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 AC092597.1-201ENST00000487352 616 ntBASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 GPAT2P1-201ENST00000444924 1672 ntBASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL27A1Q8IZC6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
COL27A1Q8IZC6 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
COL27A1Q8IZC6 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
COL27A1Q8IZC6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 AC246785.2-201ENST00000432512 513 ntBASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 ZNF815P-204ENST00000434898 1737 ntBASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms