Protein–RNA interactions for Protein: Q86UP0

CDH24, Cadherin-24, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24Q86UP0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 AC110285.5-201ENST00000611501 352 ntBASIC17.65■□□□□ 0.42
CDH24Q86UP0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.65■□□□□ 0.42
CDH24Q86UP0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 LTB4R2-202ENST00000528054 3092 ntBASIC17.65■□□□□ 0.42
CDH24Q86UP0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDH24Q86UP0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.64■□□□□ 0.42
CDH24Q86UP0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH24Q86UP0 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH24Q86UP0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH24Q86UP0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH24Q86UP0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH24Q86UP0 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 C2orf69P4-201ENST00000565394 541 ntBASIC17.64■□□□□ 0.41
CDH24Q86UP0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.64■□□□□ 0.41
CDH24Q86UP0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH24Q86UP0 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDH24Q86UP0 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDH24Q86UP0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDH24Q86UP0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 KRASP1-201ENST00000407852 552 ntBASIC17.63■□□□□ 0.41
CDH24Q86UP0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 AC092865.7-201ENST00000641832 219 ntBASIC17.63■□□□□ 0.41
CDH24Q86UP0 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDH24Q86UP0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDH24Q86UP0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH24Q86UP0 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDH24Q86UP0 AL512408.1-201ENST00000569378 2000 ntBASIC17.62■□□□□ 0.41
CDH24Q86UP0 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDH24Q86UP0 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.62■□□□□ 0.41
CDH24Q86UP0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.62■□□□□ 0.41
CDH24Q86UP0 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CDH24Q86UP0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms