Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 AC034268.1-201ENST00000441047 882 ntBASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 AC008694.1-202ENST00000636953 945 ntBASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 SDHAP1-207ENST00000440850 2000 ntBASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRTM1Q86UE6 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 AC104417.2-201ENST00000562989 1793 ntBASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 AC020763.4-201ENST00000623414 4170 ntBASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 BICD1-207ENST00000551848 1962 ntBASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRTM1Q86UE6 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 AC005332.8-201ENST00000622750 2735 ntBASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 OR10C1-204ENST00000622521 1039 ntBASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 IRX1P1-201ENST00000438849 1838 ntBASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRTM1Q86UE6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRTM1Q86UE6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms