Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 DUX4L6-201ENST00000626483 1275 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 DUX4L1-201ENST00000627662 1275 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 DUX4L8-201ENST00000629013 1275 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 DUX4L3-201ENST00000630187 1275 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 DUX4L7-201ENST00000630678 1275 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 DUX4L5-201ENST00000630834 1275 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 RBM17P2-201ENST00000616397 1405 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 AL512353.2-201ENST00000448759 1962 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 AC099791.1-201ENST00000416440 715 ntBASIC12.24□□□□□ -0.45
LINC00575Q6W349 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
LINC00575Q6W349 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.24□□□□□ -0.45
LINC00575Q6W349 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 ABALON-201ENST00000629058 1903 ntBASIC12.23□□□□□ -0.45
LINC00575Q6W349 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 GUSBP5-201ENST00000418136 578 ntBASIC12.23□□□□□ -0.45
LINC00575Q6W349 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 CCDC92B-201ENST00000575506 885 ntBASIC12.23□□□□□ -0.45
LINC00575Q6W349 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.23□□□□□ -0.45
LINC00575Q6W349 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
LINC00575Q6W349 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.22□□□□□ -0.45
LINC00575Q6W349 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
LINC00575Q6W349 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms