Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 AC005181.1-201ENST00000604782 1256 ntBASIC16.78■□□□□ 0.28
C11orf88Q6PI97 AC120498.10-201ENST00000621827 505 ntBASIC16.78■□□□□ 0.28
C11orf88Q6PI97 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 LINC01465-201ENST00000408887 1940 ntBASIC16.78■□□□□ 0.28
C11orf88Q6PI97 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
C11orf88Q6PI97 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 AL355802.2-201ENST00000402069 882 ntBASIC16.77■□□□□ 0.28
C11orf88Q6PI97 AC245052.3-201ENST00000450182 901 ntBASIC16.77■□□□□ 0.28
C11orf88Q6PI97 DUX4L16-201ENST00000555130 1264 ntBASIC16.77■□□□□ 0.28
C11orf88Q6PI97 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 MIR2861-201ENST00000636310 90 ntBASIC16.77■□□□□ 0.28
C11orf88Q6PI97 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.77■□□□□ 0.28
C11orf88Q6PI97 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
C11orf88Q6PI97 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf88Q6PI97 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf88Q6PI97 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
C11orf88Q6PI97 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
C11orf88Q6PI97 AL138781.2-201ENST00000617896 1843 ntBASIC16.77■□□□□ 0.27
C11orf88Q6PI97 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf88Q6PI97 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf88Q6PI97 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
C11orf88Q6PI97 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 SLC29A4P1-201ENST00000398760 971 ntBASIC16.76■□□□□ 0.27
C11orf88Q6PI97 BRI3-207ENST00000539286 699 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
C11orf88Q6PI97 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 AC013268.1-206ENST00000638368 961 ntBASIC16.75■□□□□ 0.27
C11orf88Q6PI97 AC112229.1-201ENST00000639295 961 ntBASIC16.75■□□□□ 0.27
C11orf88Q6PI97 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
C11orf88Q6PI97 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
C11orf88Q6PI97 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms