Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RFWD3Q6PCD5 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 KRT8P8-201ENST00000434750 1448 ntBASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 BX323043.1-201ENST00000641006 1765 ntBASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.12■□□□□ 0.81
RFWD3Q6PCD5 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 NUDT16P1-203ENST00000513809 620 ntBASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 ARL16-209ENST00000573715 763 ntTSL 3 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 ARL16-211ENST00000576135 694 ntTSL 3 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 HLA-A-209ENST00000638375 975 ntBASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RFWD3Q6PCD5 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 GXYLT1P3-201ENST00000453058 1193 ntBASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 AL445675.2-201ENST00000620291 557 ntBASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RFWD3Q6PCD5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 REXO1L10P-201ENST00000615707 1290 ntBASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms