Protein–RNA interactions for Protein: Q6P1K2

PMF1, Polyamine-modulated factor 1, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1Q6P1K2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 TSPY7P-201ENST00000431358 1114 ntBASIC20.34■□□□□ 0.85
PMF1Q6P1K2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PMF1Q6P1K2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 SNORA78-201ENST00000459373 127 ntBASIC20.33■□□□□ 0.85
PMF1Q6P1K2 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 AL031985.4-201ENST00000642138 673 ntBASIC20.33■□□□□ 0.85
PMF1Q6P1K2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PMF1Q6P1K2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.33■□□□□ 0.84
PMF1Q6P1K2 KRT8P41-201ENST00000533985 1514 ntBASIC20.32■□□□□ 0.84
PMF1Q6P1K2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.32■□□□□ 0.84
PMF1Q6P1K2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 AC011506.1-201ENST00000474329 610 ntBASIC20.31■□□□□ 0.84
PMF1Q6P1K2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PMF1Q6P1K2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PMF1Q6P1K2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms