Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 AC008764.6-201ENST00000595909 2069 ntBASIC18.19■□□□□ 0.5
LPCAT4Q643R3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LPCAT4Q643R3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LPCAT4Q643R3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 AC010141.2-201ENST00000452426 721 ntBASIC18.17■□□□□ 0.5
LPCAT4Q643R3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LPCAT4Q643R3 ESPNP-201ENST00000270691 2015 ntBASIC18.16■□□□□ 0.5
LPCAT4Q643R3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.16■□□□□ 0.5
LPCAT4Q643R3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 PHGDH-210ENST00000641115 1638 ntBASIC18.16■□□□□ 0.5
LPCAT4Q643R3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LPCAT4Q643R3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LPCAT4Q643R3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms