Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC38Q5VT99 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
LRRC38Q5VT99 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC38Q5VT99 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC38Q5VT99 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC38Q5VT99 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LRRC38Q5VT99 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.06■□□□□ 0.8
LRRC38Q5VT99 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 FEM1AP3-201ENST00000403722 1741 ntBASIC20.05■□□□□ 0.8
LRRC38Q5VT99 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.05■□□□□ 0.8
LRRC38Q5VT99 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 C1QL1P1-201ENST00000568105 661 ntBASIC20.05■□□□□ 0.8
LRRC38Q5VT99 MTDHP1-201ENST00000605323 784 ntBASIC20.05■□□□□ 0.8
LRRC38Q5VT99 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LRRC38Q5VT99 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 AC026366.1-201ENST00000488803 879 ntBASIC20.04■□□□□ 0.8
LRRC38Q5VT99 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRRC38Q5VT99 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 KRT17P3-201ENST00000420566 1262 ntBASIC20.03■□□□□ 0.8
LRRC38Q5VT99 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 AC004264.1-201ENST00000608354 794 ntBASIC20.03■□□□□ 0.8
LRRC38Q5VT99 AC069544.1-201ENST00000609399 999 ntBASIC20.03■□□□□ 0.8
LRRC38Q5VT99 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRRC38Q5VT99 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms