Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 AC141586.3-201ENST00000562166 1838 ntBASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTPN20Q4JDL3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 AL445675.2-201ENST00000620291 557 ntBASIC20.33■□□□□ 0.85
PTPN20Q4JDL3 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.33■□□□□ 0.84
PTPN20Q4JDL3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.33■□□□□ 0.84
PTPN20Q4JDL3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.33■□□□□ 0.84
PTPN20Q4JDL3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
PTPN20Q4JDL3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN20Q4JDL3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN20Q4JDL3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTPN20Q4JDL3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 RPS2P4-201ENST00000476944 856 ntBASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 TMEM191A-211ENST00000637163 1067 ntBASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTPN20Q4JDL3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 AP002982.1-201ENST00000492365 877 ntBASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 Z85996.1-201ENST00000494644 937 ntBASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 AF186192.3-201ENST00000583427 947 ntBASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTPN20Q4JDL3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 AC004980.1-204ENST00000429707 299 ntBASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.3■□□□□ 0.84
PTPN20Q4JDL3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms