Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AL023875.1-201ENST00000640777 796 ntBASIC18.34■□□□□ 0.53
RAE1P78406 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.34■□□□□ 0.53
RAE1P78406 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAE1P78406 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAE1P78406 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAE1P78406 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAE1P78406 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.33■□□□□ 0.53
RAE1P78406 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAE1P78406 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
RAE1P78406 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.33■□□□□ 0.53
RAE1P78406 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAE1P78406 IRX1P1-201ENST00000438849 1838 ntBASIC18.33■□□□□ 0.53
RAE1P78406 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAE1P78406 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAE1P78406 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
RAE1P78406 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RAE1P78406 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAE1P78406 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.33■□□□□ 0.52
RAE1P78406 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.33■□□□□ 0.52
RAE1P78406 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAE1P78406 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAE1P78406 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.33■□□□□ 0.52
RAE1P78406 AC006333.2-201ENST00000607957 2099 ntBASIC18.33■□□□□ 0.52
RAE1P78406 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAE1P78406 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RAE1P78406 CROCCP3-202ENST00000420820 1947 ntBASIC18.33■□□□□ 0.52
RAE1P78406 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAE1P78406 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.33■□□□□ 0.52
RAE1P78406 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.33■□□□□ 0.52
RAE1P78406 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.32■□□□□ 0.52
RAE1P78406 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.32■□□□□ 0.52
RAE1P78406 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.32■□□□□ 0.52
RAE1P78406 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RAE1P78406 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.32■□□□□ 0.52
RAE1P78406 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
RAE1P78406 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.32■□□□□ 0.52
RAE1P78406 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.32■□□□□ 0.52
RAE1P78406 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.32■□□□□ 0.52
RAE1P78406 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RAE1P78406 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.32■□□□□ 0.52
RAE1P78406 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAE1P78406 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAE1P78406 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAE1P78406 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.31■□□□□ 0.52
RAE1P78406 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAE1P78406 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RAE1P78406 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
RAE1P78406 KRASP1-201ENST00000407852 552 ntBASIC18.31■□□□□ 0.52
RAE1P78406 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.31■□□□□ 0.52
RAE1P78406 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.31■□□□□ 0.52
RAE1P78406 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.31■□□□□ 0.52
RAE1P78406 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RAE1P78406 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.31■□□□□ 0.52
RAE1P78406 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.31■□□□□ 0.52
RAE1P78406 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.31■□□□□ 0.52
RAE1P78406 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.31■□□□□ 0.52
RAE1P78406 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.31■□□□□ 0.52
RAE1P78406 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
RAE1P78406 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAE1P78406 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
RAE1P78406 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAE1P78406 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAE1P78406 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RAE1P78406 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.3■□□□□ 0.52
RAE1P78406 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.3■□□□□ 0.52
RAE1P78406 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.3■□□□□ 0.52
RAE1P78406 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.3■□□□□ 0.52
RAE1P78406 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAE1P78406 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms