Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.83■□□□□ 0.61
YBX1P67809 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.83■□□□□ 0.61
YBX1P67809 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.83■□□□□ 0.61
YBX1P67809 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.83■□□□□ 0.61
YBX1P67809 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.83■□□□□ 0.61
YBX1P67809 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.83■□□□□ 0.61
YBX1P67809 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
YBX1P67809 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
YBX1P67809 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YBX1P67809 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
YBX1P67809 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
YBX1P67809 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
YBX1P67809 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
YBX1P67809 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.83■□□□□ 0.6
YBX1P67809 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.83■□□□□ 0.6
YBX1P67809 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.83■□□□□ 0.6
YBX1P67809 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.83■□□□□ 0.6
YBX1P67809 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
YBX1P67809 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
YBX1P67809 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
YBX1P67809 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
YBX1P67809 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
YBX1P67809 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
YBX1P67809 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.82■□□□□ 0.6
YBX1P67809 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.82■□□□□ 0.6
YBX1P67809 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.82■□□□□ 0.6
YBX1P67809 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.82■□□□□ 0.6
YBX1P67809 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.82■□□□□ 0.6
YBX1P67809 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
YBX1P67809 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.82■□□□□ 0.6
YBX1P67809 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
YBX1P67809 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.82■□□□□ 0.6
YBX1P67809 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
YBX1P67809 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.82■□□□□ 0.6
YBX1P67809 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
YBX1P67809 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 KRT16P5-201ENST00000455284 522 ntBASIC18.81■□□□□ 0.6
YBX1P67809 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.81■□□□□ 0.6
YBX1P67809 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
YBX1P67809 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YBX1P67809 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 LINC01465-201ENST00000408887 1940 ntBASIC18.8■□□□□ 0.6
YBX1P67809 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
YBX1P67809 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
YBX1P67809 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.8■□□□□ 0.6
YBX1P67809 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.8■□□□□ 0.6
YBX1P67809 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.8■□□□□ 0.6
YBX1P67809 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
YBX1P67809 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 TUBB8P6-201ENST00000436895 1288 ntBASIC18.8■□□□□ 0.6
YBX1P67809 UBE2SP1-201ENST00000450587 669 ntBASIC18.8■□□□□ 0.6
YBX1P67809 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.8■□□□□ 0.6
YBX1P67809 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.8■□□□□ 0.6
YBX1P67809 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
YBX1P67809 Z99916.2-201ENST00000604037 246 ntBASIC18.8■□□□□ 0.6
YBX1P67809 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
YBX1P67809 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
YBX1P67809 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms