Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC61A1P61619 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC61A1P61619 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC61A1P61619 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SEC61A1P61619 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
SEC61A1P61619 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61A1P61619 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61A1P61619 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.86■□□□□ 0.29
SEC61A1P61619 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SEC61A1P61619 AC090340.1-201ENST00000620778 4980 ntBASIC16.86■□□□□ 0.29
SEC61A1P61619 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.86■□□□□ 0.29
SEC61A1P61619 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.86■□□□□ 0.29
SEC61A1P61619 AC008403.3-201ENST00000598924 454 ntBASIC16.86■□□□□ 0.29
SEC61A1P61619 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.86■□□□□ 0.29
SEC61A1P61619 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
SEC61A1P61619 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61A1P61619 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61A1P61619 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61A1P61619 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.86■□□□□ 0.29
SEC61A1P61619 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.86■□□□□ 0.29
SEC61A1P61619 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SEC61A1P61619 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61A1P61619 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61A1P61619 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SEC61A1P61619 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.86■□□□□ 0.29
SEC61A1P61619 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SEC61A1P61619 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.85■□□□□ 0.29
SEC61A1P61619 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.85■□□□□ 0.29
SEC61A1P61619 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SEC61A1P61619 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.85■□□□□ 0.29
SEC61A1P61619 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.85■□□□□ 0.29
SEC61A1P61619 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SEC61A1P61619 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SEC61A1P61619 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.85■□□□□ 0.29
SEC61A1P61619 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SEC61A1P61619 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SEC61A1P61619 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.84■□□□□ 0.29
SEC61A1P61619 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SEC61A1P61619 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.84■□□□□ 0.29
SEC61A1P61619 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 AC128676.1-201ENST00000454392 318 ntBASIC16.84■□□□□ 0.29
SEC61A1P61619 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.84■□□□□ 0.29
SEC61A1P61619 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 SOX15-203ENST00000570788 1093 ntBASIC16.84■□□□□ 0.29
SEC61A1P61619 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 KRT8P36-201ENST00000489121 1440 ntBASIC16.84■□□□□ 0.29
SEC61A1P61619 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 AC079598.2-202ENST00000546624 1451 ntBASIC16.84■□□□□ 0.29
SEC61A1P61619 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SEC61A1P61619 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.84■□□□□ 0.29
SEC61A1P61619 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEC61A1P61619 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEC61A1P61619 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
SEC61A1P61619 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SEC61A1P61619 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SEC61A1P61619 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms