Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SPCS3P61009 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.68■□□□□ 0.1
SPCS3P61009 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SPCS3P61009 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS3P61009 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.67■□□□□ 0.1
SPCS3P61009 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS3P61009 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SPCS3P61009 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS3P61009 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS3P61009 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS3P61009 AC018553.1-201ENST00000616682 1458 ntBASIC15.67■□□□□ 0.1
SPCS3P61009 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 CYP2T1P-201ENST00000432607 1285 ntBASIC15.67■□□□□ 0.1
SPCS3P61009 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.67■□□□□ 0.1
SPCS3P61009 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS3P61009 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.67■□□□□ 0.1
SPCS3P61009 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SPCS3P61009 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.67■□□□□ 0.1
SPCS3P61009 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPCS3P61009 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPCS3P61009 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.66■□□□□ 0.1
SPCS3P61009 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC15.66■□□□□ 0.1
SPCS3P61009 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.66■□□□□ 0.1
SPCS3P61009 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.66■□□□□ 0.1
SPCS3P61009 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.66■□□□□ 0.1
SPCS3P61009 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.66■□□□□ 0.1
SPCS3P61009 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC15.66■□□□□ 0.1
SPCS3P61009 OR10C1-204ENST00000622521 1039 ntBASIC15.66■□□□□ 0.1
SPCS3P61009 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.66■□□□□ 0.1
SPCS3P61009 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.66■□□□□ 0.1
SPCS3P61009 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SPCS3P61009 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 AP000997.3-201ENST00000623333 2250 ntBASIC15.66■□□□□ 0.1
SPCS3P61009 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPCS3P61009 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPCS3P61009 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.66■□□□□ 0.1
SPCS3P61009 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
SPCS3P61009 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SPCS3P61009 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.66■□□□□ 0.1
SPCS3P61009 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPCS3P61009 AC116351.2-201ENST00000606540 1585 ntBASIC15.66■□□□□ 0.1
SPCS3P61009 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.66■□□□□ 0.1
SPCS3P61009 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPCS3P61009 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPCS3P61009 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.65■□□□□ 0.1
SPCS3P61009 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SPCS3P61009 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms