Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.51■□□□□ 0.39
SUMO3P55854 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.51■□□□□ 0.39
SUMO3P55854 Z85996.1-201ENST00000494644 937 ntBASIC17.51■□□□□ 0.39
SUMO3P55854 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.51■□□□□ 0.39
SUMO3P55854 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.51■□□□□ 0.39
SUMO3P55854 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.51■□□□□ 0.39
SUMO3P55854 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.51■□□□□ 0.39
SUMO3P55854 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.51■□□□□ 0.39
SUMO3P55854 AC116562.4-201ENST00000641316 2276 ntBASIC17.51■□□□□ 0.39
SUMO3P55854 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SUMO3P55854 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
SUMO3P55854 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.51■□□□□ 0.39
SUMO3P55854 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SUMO3P55854 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.5■□□□□ 0.39
SUMO3P55854 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.5■□□□□ 0.39
SUMO3P55854 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.5■□□□□ 0.39
SUMO3P55854 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SUMO3P55854 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.5■□□□□ 0.39
SUMO3P55854 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.5■□□□□ 0.39
SUMO3P55854 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.5■□□□□ 0.39
SUMO3P55854 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.5■□□□□ 0.39
SUMO3P55854 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.5■□□□□ 0.39
SUMO3P55854 CR392000.1-201ENST00000624770 1228 ntBASIC17.5■□□□□ 0.39
SUMO3P55854 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.5■□□□□ 0.39
SUMO3P55854 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.5■□□□□ 0.39
SUMO3P55854 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.5■□□□□ 0.39
SUMO3P55854 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.5■□□□□ 0.39
SUMO3P55854 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SUMO3P55854 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
SUMO3P55854 AIRN-201ENST00000601203 4374 ntBASIC17.5■□□□□ 0.39
SUMO3P55854 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SUMO3P55854 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.49■□□□□ 0.39
SUMO3P55854 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.49■□□□□ 0.39
SUMO3P55854 AC141586.3-201ENST00000562166 1838 ntBASIC17.49■□□□□ 0.39
SUMO3P55854 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SUMO3P55854 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SUMO3P55854 LINC01465-201ENST00000408887 1940 ntBASIC17.49■□□□□ 0.39
SUMO3P55854 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
SUMO3P55854 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.49■□□□□ 0.39
SUMO3P55854 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.49■□□□□ 0.39
SUMO3P55854 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SUMO3P55854 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.49■□□□□ 0.39
SUMO3P55854 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.49■□□□□ 0.39
SUMO3P55854 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.49■□□□□ 0.39
SUMO3P55854 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 AC008550.1-201ENST00000511500 884 ntBASIC17.49■□□□□ 0.39
SUMO3P55854 CD177P1-201ENST00000606252 935 ntBASIC17.49■□□□□ 0.39
SUMO3P55854 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.49■□□□□ 0.39
SUMO3P55854 AL049637.2-201ENST00000641778 930 ntBASIC17.49■□□□□ 0.39
SUMO3P55854 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SUMO3P55854 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.49■□□□□ 0.39
SUMO3P55854 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SUMO3P55854 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SUMO3P55854 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.48■□□□□ 0.39
SUMO3P55854 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SUMO3P55854 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SUMO3P55854 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SUMO3P55854 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.48■□□□□ 0.39
SUMO3P55854 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
SUMO3P55854 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.48■□□□□ 0.39
SUMO3P55854 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SUMO3P55854 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.48■□□□□ 0.39
SUMO3P55854 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SUMO3P55854 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.48■□□□□ 0.39
SUMO3P55854 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.48■□□□□ 0.39
SUMO3P55854 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SUMO3P55854 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms