Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 DUSP5P2-201ENST00000426873 1033 ntBASIC17.97■□□□□ 0.47
CDH12P55289 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC17.97■□□□□ 0.47
CDH12P55289 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.97■□□□□ 0.47
CDH12P55289 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.97■□□□□ 0.47
CDH12P55289 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CDH12P55289 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.97■□□□□ 0.47
CDH12P55289 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH12P55289 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH12P55289 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH12P55289 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
CDH12P55289 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH12P55289 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH12P55289 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CDH12P55289 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CDH12P55289 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH12P55289 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH12P55289 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.96■□□□□ 0.47
CDH12P55289 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.96■□□□□ 0.47
CDH12P55289 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.96■□□□□ 0.47
CDH12P55289 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.96■□□□□ 0.47
CDH12P55289 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CDH12P55289 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CDH12P55289 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CDH12P55289 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CDH12P55289 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CDH12P55289 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.96■□□□□ 0.46
CDH12P55289 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.96■□□□□ 0.46
CDH12P55289 AC116351.2-201ENST00000606540 1585 ntBASIC17.96■□□□□ 0.46
CDH12P55289 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.96■□□□□ 0.46
CDH12P55289 AC090340.1-201ENST00000620778 4980 ntBASIC17.96■□□□□ 0.46
CDH12P55289 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.95■□□□□ 0.46
CDH12P55289 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 AL390719.1-204ENST00000412397 1219 ntBASIC17.95■□□□□ 0.46
CDH12P55289 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH12P55289 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDH12P55289 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.95■□□□□ 0.46
CDH12P55289 AC092118.2-201ENST00000613495 667 ntBASIC17.95■□□□□ 0.46
CDH12P55289 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 AC006333.2-201ENST00000607957 2099 ntBASIC17.95■□□□□ 0.46
CDH12P55289 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.95■□□□□ 0.46
CDH12P55289 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 AC141586.3-201ENST00000562166 1838 ntBASIC17.95■□□□□ 0.46
CDH12P55289 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDH12P55289 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDH12P55289 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDH12P55289 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CDH12P55289 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.95■□□□□ 0.46
CDH12P55289 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms