Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.97■□□□□ 0.47
PSMD4P55036 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.97■□□□□ 0.47
PSMD4P55036 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.97■□□□□ 0.47
PSMD4P55036 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PSMD4P55036 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.97■□□□□ 0.47
PSMD4P55036 AC124016.1-201ENST00000609552 612 ntBASIC17.97■□□□□ 0.47
PSMD4P55036 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PSMD4P55036 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.97■□□□□ 0.47
PSMD4P55036 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PSMD4P55036 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSMD4P55036 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.96■□□□□ 0.47
PSMD4P55036 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSMD4P55036 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.96■□□□□ 0.47
PSMD4P55036 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PSMD4P55036 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.96■□□□□ 0.47
PSMD4P55036 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.96■□□□□ 0.47
PSMD4P55036 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
PSMD4P55036 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PSMD4P55036 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PSMD4P55036 FAM197Y4-202ENST00000622692 608 ntBASIC17.96■□□□□ 0.47
PSMD4P55036 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.96■□□□□ 0.47
PSMD4P55036 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.96■□□□□ 0.47
PSMD4P55036 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.96■□□□□ 0.47
PSMD4P55036 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PSMD4P55036 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.96■□□□□ 0.47
PSMD4P55036 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.96■□□□□ 0.47
PSMD4P55036 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PSMD4P55036 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PSMD4P55036 AC116562.4-201ENST00000641316 2276 ntBASIC17.96■□□□□ 0.47
PSMD4P55036 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PSMD4P55036 AC093484.2-201ENST00000580996 2166 ntBASIC17.96■□□□□ 0.46
PSMD4P55036 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.46
PSMD4P55036 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
PSMD4P55036 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.95■□□□□ 0.46
PSMD4P55036 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.95■□□□□ 0.46
PSMD4P55036 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PSMD4P55036 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.95■□□□□ 0.46
PSMD4P55036 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 RPPH1-201ENST00000516869 333 ntBASIC17.95■□□□□ 0.46
PSMD4P55036 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PSMD4P55036 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
PSMD4P55036 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PSMD4P55036 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.95■□□□□ 0.46
PSMD4P55036 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PSMD4P55036 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.95■□□□□ 0.46
PSMD4P55036 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PSMD4P55036 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.95■□□□□ 0.46
PSMD4P55036 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSMD4P55036 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSMD4P55036 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PSMD4P55036 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSMD4P55036 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
PSMD4P55036 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSMD4P55036 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSMD4P55036 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSMD4P55036 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.94■□□□□ 0.46
PSMD4P55036 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.94■□□□□ 0.46
PSMD4P55036 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PSMD4P55036 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PSMD4P55036 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.94■□□□□ 0.46
PSMD4P55036 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.94■□□□□ 0.46
PSMD4P55036 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
PSMD4P55036 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.94■□□□□ 0.46
PSMD4P55036 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.94■□□□□ 0.46
PSMD4P55036 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms