Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ATXN1P54253 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN1P54253 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATXN1P54253 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN1P54253 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN1P54253 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
ATXN1P54253 RARRES2P10-201ENST00000564312 460 ntBASIC20.28■□□□□ 0.84
ATXN1P54253 AC145285.6-201ENST00000604632 637 ntBASIC20.28■□□□□ 0.84
ATXN1P54253 MIR6786-201ENST00000616843 113 ntBASIC20.28■□□□□ 0.84
ATXN1P54253 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.28■□□□□ 0.84
ATXN1P54253 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
ATXN1P54253 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN1P54253 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ATXN1P54253 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ATXN1P54253 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN1P54253 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN1P54253 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN1P54253 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.27■□□□□ 0.84
ATXN1P54253 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ATXN1P54253 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN1P54253 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.27■□□□□ 0.84
ATXN1P54253 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.27■□□□□ 0.84
ATXN1P54253 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.27■□□□□ 0.84
ATXN1P54253 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN1P54253 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN1P54253 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
ATXN1P54253 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.27■□□□□ 0.84
ATXN1P54253 AC026471.5-201ENST00000615068 467 ntBASIC20.27■□□□□ 0.84
ATXN1P54253 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.27■□□□□ 0.84
ATXN1P54253 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ATXN1P54253 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ATXN1P54253 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
ATXN1P54253 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.27■□□□□ 0.83
ATXN1P54253 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.83
ATXN1P54253 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN1P54253 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATXN1P54253 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN1P54253 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ATXN1P54253 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
ATXN1P54253 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ATXN1P54253 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ATXN1P54253 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.26■□□□□ 0.83
ATXN1P54253 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN1P54253 KRT16P5-201ENST00000455284 522 ntBASIC20.26■□□□□ 0.83
ATXN1P54253 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.26■□□□□ 0.83
ATXN1P54253 AP003071.4-201ENST00000562276 1284 ntBASIC20.26■□□□□ 0.83
ATXN1P54253 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.26■□□□□ 0.83
ATXN1P54253 AC004264.1-201ENST00000608354 794 ntBASIC20.26■□□□□ 0.83
ATXN1P54253 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN1P54253 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.26■□□□□ 0.83
ATXN1P54253 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.26■□□□□ 0.83
ATXN1P54253 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ATXN1P54253 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.25■□□□□ 0.83
ATXN1P54253 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
ATXN1P54253 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.25■□□□□ 0.83
ATXN1P54253 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.25■□□□□ 0.83
ATXN1P54253 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.25■□□□□ 0.83
ATXN1P54253 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 C1QL1P1-201ENST00000568105 661 ntBASIC20.25■□□□□ 0.83
ATXN1P54253 NTF6B-201ENST00000591913 560 ntBASIC20.25■□□□□ 0.83
ATXN1P54253 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ATXN1P54253 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.25■□□□□ 0.83
ATXN1P54253 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ATXN1P54253 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ATXN1P54253 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.25■□□□□ 0.83
ATXN1P54253 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATXN1P54253 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.24■□□□□ 0.83
ATXN1P54253 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ATXN1P54253 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
ATXN1P54253 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms