Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ATXN3P54252 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATXN3P54252 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.67■□□□□ 0.74
ATXN3P54252 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.67■□□□□ 0.74
ATXN3P54252 SLC25A3P1-201ENST00000443844 931 ntBASIC19.67■□□□□ 0.74
ATXN3P54252 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
ATXN3P54252 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.67■□□□□ 0.74
ATXN3P54252 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.67■□□□□ 0.74
ATXN3P54252 NTF6B-201ENST00000591913 560 ntBASIC19.67■□□□□ 0.74
ATXN3P54252 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ATXN3P54252 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.67■□□□□ 0.74
ATXN3P54252 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATXN3P54252 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATXN3P54252 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.66■□□□□ 0.74
ATXN3P54252 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.66■□□□□ 0.74
ATXN3P54252 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.66■□□□□ 0.74
ATXN3P54252 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.66■□□□□ 0.74
ATXN3P54252 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.66■□□□□ 0.74
ATXN3P54252 AC116562.4-201ENST00000641316 2276 ntBASIC19.66■□□□□ 0.74
ATXN3P54252 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 HLA-G-202ENST00000376815 851 ntBASIC19.66■□□□□ 0.74
ATXN3P54252 HLA-G-203ENST00000376818 1127 ntBASIC19.66■□□□□ 0.74
ATXN3P54252 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.66■□□□□ 0.74
ATXN3P54252 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.66■□□□□ 0.74
ATXN3P54252 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 KRT16P1-201ENST00000399124 1418 ntBASIC19.66■□□□□ 0.74
ATXN3P54252 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATXN3P54252 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.66■□□□□ 0.74
ATXN3P54252 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATXN3P54252 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.65■□□□□ 0.74
ATXN3P54252 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.65■□□□□ 0.74
ATXN3P54252 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.65■□□□□ 0.74
ATXN3P54252 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.65■□□□□ 0.74
ATXN3P54252 DUX4L26-201ENST00000489078 1255 ntBASIC19.65■□□□□ 0.74
ATXN3P54252 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.65■□□□□ 0.74
ATXN3P54252 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.65■□□□□ 0.74
ATXN3P54252 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.65■□□□□ 0.74
ATXN3P54252 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
ATXN3P54252 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.65■□□□□ 0.74
ATXN3P54252 CYP2D8P-201ENST00000433633 1490 ntBASIC19.65■□□□□ 0.74
ATXN3P54252 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATXN3P54252 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ATXN3P54252 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
ATXN3P54252 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATXN3P54252 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATXN3P54252 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATXN3P54252 AC011484.1-201ENST00000377652 1995 ntBASIC19.64■□□□□ 0.74
ATXN3P54252 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ATXN3P54252 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.64■□□□□ 0.73
ATXN3P54252 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.64■□□□□ 0.73
ATXN3P54252 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.64■□□□□ 0.73
ATXN3P54252 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
ATXN3P54252 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.64■□□□□ 0.73
ATXN3P54252 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3P54252 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.64■□□□□ 0.73
ATXN3P54252 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.64■□□□□ 0.73
ATXN3P54252 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3P54252 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.64■□□□□ 0.73
ATXN3P54252 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.64■□□□□ 0.73
ATXN3P54252 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3P54252 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3P54252 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3P54252 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
ATXN3P54252 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3P54252 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.64■□□□□ 0.73
ATXN3P54252 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
ATXN3P54252 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATXN3P54252 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3P54252 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3P54252 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ATXN3P54252 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
ATXN3P54252 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms