Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEK3P51956 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NEK3P51956 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK3P51956 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK3P51956 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK3P51956 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
NEK3P51956 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.9■□□□□ 0.78
NEK3P51956 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.9■□□□□ 0.78
NEK3P51956 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEK3P51956 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.89■□□□□ 0.78
NEK3P51956 AC026471.1-201ENST00000564629 3026 ntBASIC19.89■□□□□ 0.78
NEK3P51956 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.89■□□□□ 0.77
NEK3P51956 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.89■□□□□ 0.77
NEK3P51956 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
NEK3P51956 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.89■□□□□ 0.77
NEK3P51956 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.89■□□□□ 0.77
NEK3P51956 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.89■□□□□ 0.77
NEK3P51956 AL049637.2-201ENST00000641778 930 ntBASIC19.89■□□□□ 0.77
NEK3P51956 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEK3P51956 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.89■□□□□ 0.77
NEK3P51956 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK3P51956 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NEK3P51956 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK3P51956 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK3P51956 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK3P51956 AC116351.2-201ENST00000606540 1585 ntBASIC19.88■□□□□ 0.77
NEK3P51956 AC009237.14-201ENST00000609975 1594 ntBASIC19.88■□□□□ 0.77
NEK3P51956 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
NEK3P51956 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.88■□□□□ 0.77
NEK3P51956 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK3P51956 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.88■□□□□ 0.77
NEK3P51956 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEK3P51956 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.87■□□□□ 0.77
NEK3P51956 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
NEK3P51956 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 HTR7P1-201ENST00000538670 1336 ntBASIC19.87■□□□□ 0.77
NEK3P51956 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.87■□□□□ 0.77
NEK3P51956 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.87■□□□□ 0.77
NEK3P51956 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.87■□□□□ 0.77
NEK3P51956 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NEK3P51956 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK3P51956 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NEK3P51956 AL353807.1-201ENST00000427475 662 ntBASIC19.86■□□□□ 0.77
NEK3P51956 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.86■□□□□ 0.77
NEK3P51956 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.86■□□□□ 0.77
NEK3P51956 AC113410.3-201ENST00000623366 203 ntBASIC19.86■□□□□ 0.77
NEK3P51956 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.86■□□□□ 0.77
NEK3P51956 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.86■□□□□ 0.77
NEK3P51956 PHGDH-210ENST00000641115 1638 ntBASIC19.86■□□□□ 0.77
NEK3P51956 AP006587.1-201ENST00000534129 1502 ntBASIC19.86■□□□□ 0.77
NEK3P51956 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NEK3P51956 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
NEK3P51956 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NEK3P51956 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.85■□□□□ 0.77
NEK3P51956 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NEK3P51956 AC093503.3-201ENST00000624917 2352 ntBASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms