Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.99■□□□□ 0.31
CCR9P51686 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.99■□□□□ 0.31
CCR9P51686 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 AL390719.1-204ENST00000412397 1219 ntBASIC16.99■□□□□ 0.31
CCR9P51686 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CCR9P51686 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.99■□□□□ 0.31
CCR9P51686 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCR9P51686 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCR9P51686 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CCR9P51686 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.98■□□□□ 0.31
CCR9P51686 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 AC006333.2-201ENST00000607957 2099 ntBASIC16.98■□□□□ 0.31
CCR9P51686 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.98■□□□□ 0.31
CCR9P51686 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCR9P51686 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.98■□□□□ 0.31
CCR9P51686 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CCR9P51686 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCR9P51686 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.98■□□□□ 0.31
CCR9P51686 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CCR9P51686 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCR9P51686 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.98■□□□□ 0.31
CCR9P51686 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.97■□□□□ 0.31
CCR9P51686 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.97■□□□□ 0.31
CCR9P51686 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.97■□□□□ 0.31
CCR9P51686 AC005829.2-201ENST00000571422 1056 ntBASIC16.97■□□□□ 0.31
CCR9P51686 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.97■□□□□ 0.31
CCR9P51686 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.97■□□□□ 0.31
CCR9P51686 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.97■□□□□ 0.31
CCR9P51686 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCR9P51686 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CCR9P51686 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CCR9P51686 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.96■□□□□ 0.31
CCR9P51686 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCR9P51686 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCR9P51686 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.96■□□□□ 0.31
CCR9P51686 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCR9P51686 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.96■□□□□ 0.3
CCR9P51686 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCR9P51686 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCR9P51686 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCR9P51686 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCR9P51686 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCR9P51686 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CCR9P51686 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CCR9P51686 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCR9P51686 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCR9P51686 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.95■□□□□ 0.3
CCR9P51686 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.95■□□□□ 0.3
CCR9P51686 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCR9P51686 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCR9P51686 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCR9P51686 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CCR9P51686 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CCR9P51686 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CCR9P51686 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms