Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GABRA4P48169 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.34■□□□□ 0.53
GABRA4P48169 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
GABRA4P48169 RCN1P1-201ENST00000400413 996 ntBASIC18.34■□□□□ 0.53
GABRA4P48169 FAM210CP-201ENST00000445714 574 ntBASIC18.34■□□□□ 0.53
GABRA4P48169 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRA4P48169 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 C2orf69P3-201ENST00000565542 1120 ntBASIC18.34■□□□□ 0.53
GABRA4P48169 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
GABRA4P48169 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.34■□□□□ 0.53
GABRA4P48169 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.34■□□□□ 0.53
GABRA4P48169 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.34■□□□□ 0.53
GABRA4P48169 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.34■□□□□ 0.53
GABRA4P48169 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GABRA4P48169 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.33■□□□□ 0.53
GABRA4P48169 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRA4P48169 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GABRA4P48169 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GABRA4P48169 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
GABRA4P48169 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GABRA4P48169 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA4P48169 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA4P48169 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA4P48169 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.33■□□□□ 0.52
GABRA4P48169 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GABRA4P48169 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA4P48169 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.33■□□□□ 0.52
GABRA4P48169 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
GABRA4P48169 EGLN1P1-201ENST00000531623 762 ntBASIC18.33■□□□□ 0.52
GABRA4P48169 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
GABRA4P48169 CKBP1-201ENST00000565489 1086 ntBASIC18.33■□□□□ 0.52
GABRA4P48169 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA4P48169 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.33■□□□□ 0.52
GABRA4P48169 SDHAP1-207ENST00000440850 2000 ntBASIC18.33■□□□□ 0.52
GABRA4P48169 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GABRA4P48169 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
GABRA4P48169 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA4P48169 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.33■□□□□ 0.52
GABRA4P48169 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA4P48169 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GABRA4P48169 KRT8P11-201ENST00000409686 1436 ntBASIC18.32■□□□□ 0.52
GABRA4P48169 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA4P48169 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA4P48169 KRT18P22-201ENST00000402024 1347 ntBASIC18.32■□□□□ 0.52
GABRA4P48169 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA4P48169 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA4P48169 INGX-201ENST00000359239 846 ntBASIC18.32■□□□□ 0.52
GABRA4P48169 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
GABRA4P48169 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRA4P48169 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.32■□□□□ 0.52
GABRA4P48169 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA4P48169 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
GABRA4P48169 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.32■□□□□ 0.52
GABRA4P48169 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRA4P48169 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRA4P48169 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.32■□□□□ 0.52
GABRA4P48169 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA4P48169 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GABRA4P48169 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.31■□□□□ 0.52
GABRA4P48169 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.31■□□□□ 0.52
GABRA4P48169 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.31■□□□□ 0.52
GABRA4P48169 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.31■□□□□ 0.52
GABRA4P48169 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.31■□□□□ 0.52
GABRA4P48169 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.31■□□□□ 0.52
GABRA4P48169 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.31■□□□□ 0.52
GABRA4P48169 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GABRA4P48169 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.31■□□□□ 0.52
GABRA4P48169 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
GABRA4P48169 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.31■□□□□ 0.52
GABRA4P48169 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 PCDHAC2-203ENST00000615316 3011 ntBASIC18.31■□□□□ 0.52
GABRA4P48169 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GABRA4P48169 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRA4P48169 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRA4P48169 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRA4P48169 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRA4P48169 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRA4P48169 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms