Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHRNA4P43681 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.48■□□□□ 0.71
CHRNA4P43681 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA4P43681 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
CHRNA4P43681 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA4P43681 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.48■□□□□ 0.71
CHRNA4P43681 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA4P43681 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA4P43681 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.48■□□□□ 0.71
CHRNA4P43681 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.48■□□□□ 0.71
CHRNA4P43681 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.48■□□□□ 0.71
CHRNA4P43681 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHRNA4P43681 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA4P43681 AC098818.2-201ENST00000564925 2320 ntBASIC19.48■□□□□ 0.71
CHRNA4P43681 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CHRNA4P43681 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA4P43681 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA4P43681 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHRNA4P43681 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.48■□□□□ 0.71
CHRNA4P43681 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHRNA4P43681 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.48■□□□□ 0.71
CHRNA4P43681 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CHRNA4P43681 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA4P43681 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA4P43681 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.47■□□□□ 0.71
CHRNA4P43681 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.47■□□□□ 0.71
CHRNA4P43681 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.47■□□□□ 0.71
CHRNA4P43681 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.47■□□□□ 0.71
CHRNA4P43681 FAM197Y4-202ENST00000622692 608 ntBASIC19.47■□□□□ 0.71
CHRNA4P43681 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA4P43681 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.47■□□□□ 0.71
CHRNA4P43681 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CHRNA4P43681 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA4P43681 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA4P43681 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.47■□□□□ 0.71
CHRNA4P43681 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
CHRNA4P43681 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 AP000974.1-201ENST00000623909 2387 ntBASIC19.47■□□□□ 0.71
CHRNA4P43681 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CHRNA4P43681 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA4P43681 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA4P43681 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA4P43681 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA4P43681 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.46■□□□□ 0.71
CHRNA4P43681 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 AL158047.1-201ENST00000445918 881 ntBASIC19.46■□□□□ 0.71
CHRNA4P43681 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA4P43681 AC142381.4-202ENST00000563973 229 ntBASIC19.46■□□□□ 0.71
CHRNA4P43681 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA4P43681 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA4P43681 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA4P43681 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.46■□□□□ 0.71
CHRNA4P43681 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 HTR7P1-201ENST00000538670 1336 ntBASIC19.46■□□□□ 0.71
CHRNA4P43681 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CHRNA4P43681 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CHRNA4P43681 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CHRNA4P43681 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CHRNA4P43681 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHRNA4P43681 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA4P43681 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA4P43681 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CHRNA4P43681 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CHRNA4P43681 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.45■□□□□ 0.7
CHRNA4P43681 GCSHP5-201ENST00000443090 522 ntBASIC19.45■□□□□ 0.7
CHRNA4P43681 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.45■□□□□ 0.7
CHRNA4P43681 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CHRNA4P43681 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA4P43681 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.45■□□□□ 0.7
CHRNA4P43681 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms