Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFC5P40937 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFC5P40937 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RFC5P40937 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.34■■□□□ 1.01
RFC5P40937 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFC5P40937 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFC5P40937 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RFC5P40937 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.34■■□□□ 1.01
RFC5P40937 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.34■■□□□ 1.01
RFC5P40937 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFC5P40937 CYP2D8P-201ENST00000433633 1490 ntBASIC21.33■■□□□ 1.01
RFC5P40937 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.33■■□□□ 1.01
RFC5P40937 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFC5P40937 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
RFC5P40937 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFC5P40937 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFC5P40937 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RFC5P40937 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFC5P40937 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RFC5P40937 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.33■■□□□ 1.01
RFC5P40937 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.33■■□□□ 1.01
RFC5P40937 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.33■■□□□ 1.01
RFC5P40937 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.33■■□□□ 1.01
RFC5P40937 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.33■■□□□ 1.01
RFC5P40937 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.33■■□□□ 1.01
RFC5P40937 C2orf69P3-201ENST00000565542 1120 ntBASIC21.33■■□□□ 1.01
RFC5P40937 AC145285.6-201ENST00000604632 637 ntBASIC21.33■■□□□ 1.01
RFC5P40937 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
RFC5P40937 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.33■■□□□ 1
RFC5P40937 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RFC5P40937 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
RFC5P40937 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.32■■□□□ 1
RFC5P40937 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.32■■□□□ 1
RFC5P40937 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RFC5P40937 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 AC125437.2-201ENST00000625180 2167 ntBASIC21.32■■□□□ 1
RFC5P40937 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.32■■□□□ 1
RFC5P40937 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.32■■□□□ 1
RFC5P40937 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.32■■□□□ 1
RFC5P40937 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.32■■□□□ 1
RFC5P40937 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.32■■□□□ 1
RFC5P40937 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.32■■□□□ 1
RFC5P40937 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.32■■□□□ 1
RFC5P40937 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RFC5P40937 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RFC5P40937 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
RFC5P40937 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.31■■□□□ 1
RFC5P40937 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.31■■□□□ 1
RFC5P40937 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
RFC5P40937 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC21.31■■□□□ 1
RFC5P40937 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
RFC5P40937 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.31■■□□□ 1
RFC5P40937 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RFC5P40937 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.31■■□□□ 1
RFC5P40937 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.3■■□□□ 1
RFC5P40937 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFC5P40937 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC5P40937 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
RFC5P40937 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC5P40937 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.3■■□□□ 1
RFC5P40937 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.3■■□□□ 1
RFC5P40937 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.3■■□□□ 1
RFC5P40937 PRSS44-201ENST00000515154 1146 ntBASIC21.3■■□□□ 1
RFC5P40937 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.3■■□□□ 1
RFC5P40937 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.3■■□□□ 1
RFC5P40937 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.3■■□□□ 1
RFC5P40937 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.3■■□□□ 1
RFC5P40937 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.3■■□□□ 1
RFC5P40937 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RFC5P40937 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
RFC5P40937 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.3■■□□□ 1
RFC5P40937 LINC01568-207ENST00000641790 1380 ntBASIC21.3■■□□□ 1
RFC5P40937 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.3■■□□□ 1
RFC5P40937 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.3■■□□□ 1
RFC5P40937 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC5P40937 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.29■■□□□ 1
RFC5P40937 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.29■■□□□ 1
RFC5P40937 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
RFC5P40937 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.29■■□□□ 1
RFC5P40937 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFC5P40937 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFC5P40937 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms