Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC12P31275 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HOXC12P31275 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXC12P31275 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC12P31275 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC12P31275 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC12P31275 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC12P31275 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC12P31275 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.13■□□□□ 0.33
HOXC12P31275 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC12P31275 KRT18P16-201ENST00000510337 1294 ntBASIC17.13■□□□□ 0.33
HOXC12P31275 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC12P31275 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC12P31275 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC12P31275 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC12P31275 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
HOXC12P31275 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC12P31275 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.13■□□□□ 0.33
HOXC12P31275 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
HOXC12P31275 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.13■□□□□ 0.33
HOXC12P31275 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HOXC12P31275 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC12P31275 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC12P31275 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC12P31275 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXC12P31275 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HOXC12P31275 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 TMEM179-206ENST00000616017 1645 ntBASIC17.12■□□□□ 0.33
HOXC12P31275 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.12■□□□□ 0.33
HOXC12P31275 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC12P31275 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.12■□□□□ 0.33
HOXC12P31275 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC12P31275 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.12■□□□□ 0.33
HOXC12P31275 AF186192.3-201ENST00000583427 947 ntBASIC17.12■□□□□ 0.33
HOXC12P31275 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.12■□□□□ 0.33
HOXC12P31275 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC12P31275 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HOXC12P31275 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC12P31275 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.12■□□□□ 0.33
HOXC12P31275 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.12■□□□□ 0.33
HOXC12P31275 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HOXC12P31275 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
HOXC12P31275 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC12P31275 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC12P31275 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HOXC12P31275 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
HOXC12P31275 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC12P31275 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
HOXC12P31275 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC12P31275 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC12P31275 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXC12P31275 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXC12P31275 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.11■□□□□ 0.33
HOXC12P31275 C1QL1P1-201ENST00000568105 661 ntBASIC17.11■□□□□ 0.33
HOXC12P31275 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.11■□□□□ 0.33
HOXC12P31275 MIR6786-201ENST00000616843 113 ntBASIC17.11■□□□□ 0.33
HOXC12P31275 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC12P31275 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
HOXC12P31275 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HOXC12P31275 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
HOXC12P31275 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
HOXC12P31275 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC12P31275 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC12P31275 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 TCF3P1-201ENST00000423021 1937 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms