Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PRPH2P23942 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.39■□□□□ 0.53
PRPH2P23942 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPH2P23942 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPH2P23942 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPH2P23942 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRPH2P23942 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PRPH2P23942 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PRPH2P23942 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPH2P23942 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.39■□□□□ 0.53
PRPH2P23942 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PRPH2P23942 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
PRPH2P23942 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.38■□□□□ 0.53
PRPH2P23942 AL031598.1-201ENST00000561511 1773 ntBASIC18.38■□□□□ 0.53
PRPH2P23942 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PRPH2P23942 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPH2P23942 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.38■□□□□ 0.53
PRPH2P23942 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 C1QL1P1-201ENST00000568105 661 ntBASIC18.38■□□□□ 0.53
PRPH2P23942 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.38■□□□□ 0.53
PRPH2P23942 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.38■□□□□ 0.53
PRPH2P23942 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.38■□□□□ 0.53
PRPH2P23942 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
PRPH2P23942 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PRPH2P23942 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PRPH2P23942 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PRPH2P23942 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPH2P23942 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
PRPH2P23942 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PRPH2P23942 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.37■□□□□ 0.53
PRPH2P23942 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRPH2P23942 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.37■□□□□ 0.53
PRPH2P23942 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPH2P23942 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPH2P23942 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PRPH2P23942 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.37■□□□□ 0.53
PRPH2P23942 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
PRPH2P23942 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PRPH2P23942 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PRPH2P23942 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PRPH2P23942 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PRPH2P23942 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.36■□□□□ 0.53
PRPH2P23942 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.36■□□□□ 0.53
PRPH2P23942 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 NBPF21P-201ENST00000425093 1451 ntBASIC18.36■□□□□ 0.53
PRPH2P23942 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.36■□□□□ 0.53
PRPH2P23942 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PRPH2P23942 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
PRPH2P23942 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.36■□□□□ 0.53
PRPH2P23942 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.36■□□□□ 0.53
PRPH2P23942 RNF165-205ENST00000588679 2904 ntBASIC18.36■□□□□ 0.53
PRPH2P23942 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms