Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.64■□□□□ 0.73
NFKB1P19838 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.64■□□□□ 0.73
NFKB1P19838 AC133681.1-201ENST00000465482 601 ntBASIC19.64■□□□□ 0.73
NFKB1P19838 HLA-A-209ENST00000638375 975 ntBASIC19.64■□□□□ 0.73
NFKB1P19838 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.64■□□□□ 0.73
NFKB1P19838 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.64■□□□□ 0.73
NFKB1P19838 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
NFKB1P19838 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFKB1P19838 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.64■□□□□ 0.73
NFKB1P19838 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.64■□□□□ 0.73
NFKB1P19838 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFKB1P19838 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFKB1P19838 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFKB1P19838 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFKB1P19838 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NFKB1P19838 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
NFKB1P19838 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.64■□□□□ 0.73
NFKB1P19838 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFKB1P19838 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
NFKB1P19838 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NFKB1P19838 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NFKB1P19838 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NFKB1P19838 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NFKB1P19838 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NFKB1P19838 AC141586.3-201ENST00000562166 1838 ntBASIC19.63■□□□□ 0.73
NFKB1P19838 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.63■□□□□ 0.73
NFKB1P19838 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
NFKB1P19838 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.63■□□□□ 0.73
NFKB1P19838 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NFKB1P19838 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NFKB1P19838 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 KRT16P5-201ENST00000455284 522 ntBASIC19.63■□□□□ 0.73
NFKB1P19838 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 FAM201B-201ENST00000458407 597 ntBASIC19.63■□□□□ 0.73
NFKB1P19838 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
NFKB1P19838 C1QBPP2-201ENST00000528754 825 ntBASIC19.63■□□□□ 0.73
NFKB1P19838 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.63■□□□□ 0.73
NFKB1P19838 AC110285.5-201ENST00000611501 352 ntBASIC19.63■□□□□ 0.73
NFKB1P19838 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.63■□□□□ 0.73
NFKB1P19838 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NFKB1P19838 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.63■□□□□ 0.73
NFKB1P19838 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NFKB1P19838 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
NFKB1P19838 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
NFKB1P19838 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.62■□□□□ 0.73
NFKB1P19838 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.62■□□□□ 0.73
NFKB1P19838 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.62■□□□□ 0.73
NFKB1P19838 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
NFKB1P19838 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 AIRN-201ENST00000601203 4374 ntBASIC19.62■□□□□ 0.73
NFKB1P19838 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.62■□□□□ 0.73
NFKB1P19838 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.62■□□□□ 0.73
NFKB1P19838 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.62■□□□□ 0.73
NFKB1P19838 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
NFKB1P19838 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.62■□□□□ 0.73
NFKB1P19838 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.62■□□□□ 0.73
NFKB1P19838 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.62■□□□□ 0.73
NFKB1P19838 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
NFKB1P19838 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.62■□□□□ 0.73
NFKB1P19838 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.62■□□□□ 0.73
NFKB1P19838 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NFKB1P19838 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
NFKB1P19838 BX323043.1-201ENST00000641006 1765 ntBASIC19.62■□□□□ 0.73
NFKB1P19838 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.62■□□□□ 0.73
NFKB1P19838 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NFKB1P19838 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.61■□□□□ 0.73
NFKB1P19838 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
NFKB1P19838 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NFKB1P19838 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NFKB1P19838 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
NFKB1P19838 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms