Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.24■□□□□ 0.51
NCK1P16333 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NCK1P16333 ZNRF2P3-201ENST00000424200 374 ntBASIC18.24■□□□□ 0.51
NCK1P16333 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.24■□□□□ 0.51
NCK1P16333 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NCK1P16333 AC116351.2-201ENST00000606540 1585 ntBASIC18.24■□□□□ 0.51
NCK1P16333 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCK1P16333 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCK1P16333 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NCK1P16333 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NCK1P16333 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.23■□□□□ 0.51
NCK1P16333 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NCK1P16333 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.23■□□□□ 0.51
NCK1P16333 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
NCK1P16333 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NCK1P16333 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NCK1P16333 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.23■□□□□ 0.51
NCK1P16333 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.23■□□□□ 0.51
NCK1P16333 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NCK1P16333 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.23■□□□□ 0.51
NCK1P16333 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NCK1P16333 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.23■□□□□ 0.51
NCK1P16333 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.23■□□□□ 0.51
NCK1P16333 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NCK1P16333 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NCK1P16333 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.22■□□□□ 0.51
NCK1P16333 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.22■□□□□ 0.51
NCK1P16333 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.22■□□□□ 0.51
NCK1P16333 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
NCK1P16333 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.22■□□□□ 0.51
NCK1P16333 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.22■□□□□ 0.51
NCK1P16333 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCK1P16333 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.22■□□□□ 0.51
NCK1P16333 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NCK1P16333 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NCK1P16333 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.22■□□□□ 0.51
NCK1P16333 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NCK1P16333 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
NCK1P16333 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NCK1P16333 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
NCK1P16333 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NCK1P16333 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NCK1P16333 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.21■□□□□ 0.51
NCK1P16333 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
NCK1P16333 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NCK1P16333 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
NCK1P16333 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NCK1P16333 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
NCK1P16333 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.2■□□□□ 0.5
NCK1P16333 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.2■□□□□ 0.5
NCK1P16333 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.2■□□□□ 0.5
NCK1P16333 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NCK1P16333 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms