Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
BMP4P12644 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
BMP4P12644 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
BMP4P12644 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.66■□□□□ 0.42
BMP4P12644 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.66■□□□□ 0.42
BMP4P12644 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.66■□□□□ 0.42
BMP4P12644 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
BMP4P12644 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
BMP4P12644 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.65■□□□□ 0.42
BMP4P12644 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.65■□□□□ 0.42
BMP4P12644 AC098934.4-201ENST00000564127 592 ntBASIC17.65■□□□□ 0.42
BMP4P12644 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
BMP4P12644 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BMP4P12644 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
BMP4P12644 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
BMP4P12644 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.42
BMP4P12644 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
BMP4P12644 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BMP4P12644 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.64■□□□□ 0.41
BMP4P12644 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BMP4P12644 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.64■□□□□ 0.41
BMP4P12644 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.64■□□□□ 0.41
BMP4P12644 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
BMP4P12644 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
BMP4P12644 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.64■□□□□ 0.41
BMP4P12644 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.64■□□□□ 0.41
BMP4P12644 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.64■□□□□ 0.41
BMP4P12644 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
BMP4P12644 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
BMP4P12644 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.64■□□□□ 0.41
BMP4P12644 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.64■□□□□ 0.41
BMP4P12644 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
BMP4P12644 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
BMP4P12644 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
BMP4P12644 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
BMP4P12644 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
BMP4P12644 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.63■□□□□ 0.41
BMP4P12644 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
BMP4P12644 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.63■□□□□ 0.41
BMP4P12644 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.63■□□□□ 0.41
BMP4P12644 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
BMP4P12644 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.63■□□□□ 0.41
BMP4P12644 MYC-209ENST00000641252 345 ntBASIC17.63■□□□□ 0.41
BMP4P12644 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BMP4P12644 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
BMP4P12644 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
BMP4P12644 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms