Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RHOP08100 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RHOP08100 AC009947.2-201ENST00000444014 672 ntBASIC20.02■□□□□ 0.8
RHOP08100 KRT18P38-201ENST00000449496 1282 ntBASIC20.02■□□□□ 0.8
RHOP08100 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.02■□□□□ 0.8
RHOP08100 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.02■□□□□ 0.8
RHOP08100 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.02■□□□□ 0.8
RHOP08100 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.02■□□□□ 0.8
RHOP08100 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RHOP08100 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.02■□□□□ 0.8
RHOP08100 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.02■□□□□ 0.8
RHOP08100 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RHOP08100 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.02■□□□□ 0.8
RHOP08100 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RHOP08100 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.79
RHOP08100 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RHOP08100 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHOP08100 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHOP08100 IER3-202ENST00000376377 1350 ntBASIC20.01■□□□□ 0.79
RHOP08100 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
RHOP08100 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHOP08100 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RHOP08100 AP000523.1-201ENST00000398242 1049 ntBASIC20.01■□□□□ 0.79
RHOP08100 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHOP08100 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.01■□□□□ 0.79
RHOP08100 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.01■□□□□ 0.79
RHOP08100 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHOP08100 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.01■□□□□ 0.79
RHOP08100 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.01■□□□□ 0.79
RHOP08100 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.01■□□□□ 0.79
RHOP08100 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.01■□□□□ 0.79
RHOP08100 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RHOP08100 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHOP08100 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RHOP08100 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RHOP08100 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RHOP08100 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHOP08100 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20■□□□□ 0.79
RHOP08100 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHOP08100 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20■□□□□ 0.79
RHOP08100 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20■□□□□ 0.79
RHOP08100 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20■□□□□ 0.79
RHOP08100 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20■□□□□ 0.79
RHOP08100 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RHOP08100 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RHOP08100 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHOP08100 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHOP08100 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20■□□□□ 0.79
RHOP08100 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RHOP08100 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHOP08100 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20■□□□□ 0.79
RHOP08100 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RHOP08100 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.99■□□□□ 0.79
RHOP08100 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.99■□□□□ 0.79
RHOP08100 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.99■□□□□ 0.79
RHOP08100 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RHOP08100 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.99■□□□□ 0.79
RHOP08100 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.99■□□□□ 0.79
RHOP08100 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.99■□□□□ 0.79
RHOP08100 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RHOP08100 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.99■□□□□ 0.79
RHOP08100 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.99■□□□□ 0.79
RHOP08100 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
RHOP08100 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RHOP08100 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.99■□□□□ 0.79
RHOP08100 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.99■□□□□ 0.79
RHOP08100 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RHOP08100 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.99■□□□□ 0.79
RHOP08100 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHOP08100 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHOP08100 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHOP08100 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RHOP08100 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.98■□□□□ 0.79
RHOP08100 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.98■□□□□ 0.79
RHOP08100 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.98■□□□□ 0.79
RHOP08100 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.98■□□□□ 0.79
RHOP08100 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RHOP08100 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
RHOP08100 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHOP08100 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RHOP08100 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.98■□□□□ 0.79
RHOP08100 KRT18P56-201ENST00000507275 550 ntBASIC19.98■□□□□ 0.79
RHOP08100 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.98■□□□□ 0.79
RHOP08100 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.98■□□□□ 0.79
RHOP08100 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.98■□□□□ 0.79
RHOP08100 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RHOP08100 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.98■□□□□ 0.79
RHOP08100 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms