Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CAPNS1P04632 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPNS1P04632 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.21■□□□□ 0.67
CAPNS1P04632 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.21■□□□□ 0.67
CAPNS1P04632 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.21■□□□□ 0.67
CAPNS1P04632 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPNS1P04632 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.21■□□□□ 0.67
CAPNS1P04632 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPNS1P04632 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPNS1P04632 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPNS1P04632 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.21■□□□□ 0.67
CAPNS1P04632 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CAPNS1P04632 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPNS1P04632 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPNS1P04632 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CAPNS1P04632 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPNS1P04632 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 AL390719.1-204ENST00000412397 1219 ntBASIC19.2■□□□□ 0.66
CAPNS1P04632 CRYGFP-201ENST00000418459 633 ntBASIC19.2■□□□□ 0.66
CAPNS1P04632 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
CAPNS1P04632 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CAPNS1P04632 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPNS1P04632 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.2■□□□□ 0.66
CAPNS1P04632 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
CAPNS1P04632 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CAPNS1P04632 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CAPNS1P04632 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CAPNS1P04632 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.19■□□□□ 0.66
CAPNS1P04632 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.19■□□□□ 0.66
CAPNS1P04632 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPNS1P04632 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPNS1P04632 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CAPNS1P04632 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
CAPNS1P04632 MYC-208ENST00000641036 567 ntBASIC19.19■□□□□ 0.66
CAPNS1P04632 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.19■□□□□ 0.66
CAPNS1P04632 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.19■□□□□ 0.66
CAPNS1P04632 AC011484.1-201ENST00000377652 1995 ntBASIC19.19■□□□□ 0.66
CAPNS1P04632 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CAPNS1P04632 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CAPNS1P04632 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPNS1P04632 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CAPNS1P04632 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CAPNS1P04632 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.18■□□□□ 0.66
CAPNS1P04632 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
CAPNS1P04632 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.18■□□□□ 0.66
CAPNS1P04632 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.18■□□□□ 0.66
CAPNS1P04632 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPNS1P04632 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.18■□□□□ 0.66
CAPNS1P04632 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.18■□□□□ 0.66
CAPNS1P04632 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.18■□□□□ 0.66
CAPNS1P04632 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CAPNS1P04632 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CAPNS1P04632 AC092720.2-201ENST00000602388 1665 ntBASIC19.17■□□□□ 0.66
CAPNS1P04632 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19.17■□□□□ 0.66
CAPNS1P04632 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CAPNS1P04632 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CAPNS1P04632 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CAPNS1P04632 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms