Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
OPN1SWP03999 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.03■□□□□ 0.48
OPN1SWP03999 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.03■□□□□ 0.48
OPN1SWP03999 MIPEPP3-201ENST00000412105 444 ntBASIC18.03■□□□□ 0.48
OPN1SWP03999 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 CROCCP5-201ENST00000436658 830 ntBASIC18.03■□□□□ 0.48
OPN1SWP03999 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.03■□□□□ 0.48
OPN1SWP03999 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
OPN1SWP03999 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.03■□□□□ 0.48
OPN1SWP03999 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.03■□□□□ 0.48
OPN1SWP03999 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
OPN1SWP03999 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPN1SWP03999 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPN1SWP03999 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPN1SWP03999 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
OPN1SWP03999 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.02■□□□□ 0.48
OPN1SWP03999 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.02■□□□□ 0.48
OPN1SWP03999 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPN1SWP03999 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
OPN1SWP03999 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPN1SWP03999 SDHAP1-207ENST00000440850 2000 ntBASIC18.02■□□□□ 0.48
OPN1SWP03999 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.02■□□□□ 0.48
OPN1SWP03999 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.02■□□□□ 0.48
OPN1SWP03999 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.02■□□□□ 0.48
OPN1SWP03999 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
OPN1SWP03999 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.02■□□□□ 0.48
OPN1SWP03999 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.02■□□□□ 0.48
OPN1SWP03999 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
OPN1SWP03999 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
OPN1SWP03999 AL138781.2-201ENST00000617896 1843 ntBASIC18.02■□□□□ 0.47
OPN1SWP03999 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
OPN1SWP03999 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
OPN1SWP03999 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.02■□□□□ 0.47
OPN1SWP03999 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.02■□□□□ 0.47
OPN1SWP03999 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
OPN1SWP03999 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
OPN1SWP03999 AC104581.1-202ENST00000635932 2618 ntBASIC18.02■□□□□ 0.47
OPN1SWP03999 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
OPN1SWP03999 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
OPN1SWP03999 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
OPN1SWP03999 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 AC073210.2-201ENST00000430369 194 ntBASIC18.01■□□□□ 0.47
OPN1SWP03999 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
OPN1SWP03999 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.01■□□□□ 0.47
OPN1SWP03999 RAP2CP1-201ENST00000605103 478 ntBASIC18.01■□□□□ 0.47
OPN1SWP03999 AL137784.2-201ENST00000607332 1000 ntBASIC18.01■□□□□ 0.47
OPN1SWP03999 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.01■□□□□ 0.47
OPN1SWP03999 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.01■□□□□ 0.47
OPN1SWP03999 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
OPN1SWP03999 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
OPN1SWP03999 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18■□□□□ 0.47
OPN1SWP03999 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18■□□□□ 0.47
OPN1SWP03999 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 AC007613.1-201ENST00000572811 2597 ntBASIC18■□□□□ 0.47
OPN1SWP03999 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18■□□□□ 0.47
OPN1SWP03999 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18■□□□□ 0.47
OPN1SWP03999 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
OPN1SWP03999 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18■□□□□ 0.47
OPN1SWP03999 RPS2P52-201ENST00000469610 820 ntBASIC18■□□□□ 0.47
OPN1SWP03999 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18■□□□□ 0.47
OPN1SWP03999 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
OPN1SWP03999 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18■□□□□ 0.47
OPN1SWP03999 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
OPN1SWP03999 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18■□□□□ 0.47
OPN1SWP03999 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
OPN1SWP03999 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms