Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
PDCD6O75340 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDCD6O75340 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDCD6O75340 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDCD6O75340 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDCD6O75340 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDCD6O75340 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.29■□□□□ 0.2
PDCD6O75340 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.29■□□□□ 0.2
PDCD6O75340 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDCD6O75340 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.29■□□□□ 0.2
PDCD6O75340 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.29■□□□□ 0.2
PDCD6O75340 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.29■□□□□ 0.2
PDCD6O75340 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.29■□□□□ 0.2
PDCD6O75340 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDCD6O75340 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.29■□□□□ 0.2
PDCD6O75340 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.29■□□□□ 0.2
PDCD6O75340 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDCD6O75340 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.29■□□□□ 0.2
PDCD6O75340 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDCD6O75340 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.29■□□□□ 0.2
PDCD6O75340 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.29■□□□□ 0.2
PDCD6O75340 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PDCD6O75340 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDCD6O75340 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDCD6O75340 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDCD6O75340 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PDCD6O75340 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 SDHAP1-207ENST00000440850 2000 ntBASIC16.28■□□□□ 0.2
PDCD6O75340 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PDCD6O75340 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 SLC29A4P1-201ENST00000398760 971 ntBASIC16.28■□□□□ 0.2
PDCD6O75340 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.28■□□□□ 0.2
PDCD6O75340 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.28■□□□□ 0.2
PDCD6O75340 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PDCD6O75340 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.28■□□□□ 0.2
PDCD6O75340 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.28■□□□□ 0.2
PDCD6O75340 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDCD6O75340 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
PDCD6O75340 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.27■□□□□ 0.2
PDCD6O75340 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PDCD6O75340 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PDCD6O75340 AC092368.3-202ENST00000574180 1591 ntBASIC16.27■□□□□ 0.2
PDCD6O75340 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PDCD6O75340 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.27■□□□□ 0.2
PDCD6O75340 HLA-B-256ENST00000639848 1089 ntBASIC16.27■□□□□ 0.2
PDCD6O75340 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PDCD6O75340 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDCD6O75340 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PDCD6O75340 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDCD6O75340 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDCD6O75340 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PDCD6O75340 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms