Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.52■□□□□ 0.55
CPNE3O75131 AC073314.1-201ENST00000568729 2216 ntBASIC18.51■□□□□ 0.55
CPNE3O75131 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.51■□□□□ 0.55
CPNE3O75131 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE3O75131 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 B3GAT3P1-201ENST00000471720 806 ntBASIC18.51■□□□□ 0.55
CPNE3O75131 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE3O75131 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 AC010331.1-201ENST00000611423 582 ntBASIC18.51■□□□□ 0.55
CPNE3O75131 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
CPNE3O75131 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.51■□□□□ 0.55
CPNE3O75131 AP005212.1-201ENST00000581547 1997 ntBASIC18.51■□□□□ 0.55
CPNE3O75131 LINC01568-207ENST00000641790 1380 ntBASIC18.51■□□□□ 0.55
CPNE3O75131 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE3O75131 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.51■□□□□ 0.55
CPNE3O75131 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CPNE3O75131 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CPNE3O75131 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CPNE3O75131 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CPNE3O75131 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CPNE3O75131 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE3O75131 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 MESTP1-201ENST00000404287 994 ntBASIC18.5■□□□□ 0.55
CPNE3O75131 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.5■□□□□ 0.55
CPNE3O75131 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.5■□□□□ 0.55
CPNE3O75131 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE3O75131 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.5■□□□□ 0.55
CPNE3O75131 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE3O75131 AC005363.2-201ENST00000618631 242 ntBASIC18.5■□□□□ 0.55
CPNE3O75131 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.5■□□□□ 0.55
CPNE3O75131 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE3O75131 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE3O75131 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CPNE3O75131 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.5■□□□□ 0.55
CPNE3O75131 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE3O75131 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
CPNE3O75131 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.49■□□□□ 0.55
CPNE3O75131 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CPNE3O75131 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE3O75131 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.49■□□□□ 0.55
CPNE3O75131 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE3O75131 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE3O75131 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CPNE3O75131 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.49■□□□□ 0.55
CPNE3O75131 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CPNE3O75131 KRT18P22-201ENST00000402024 1347 ntBASIC18.49■□□□□ 0.55
CPNE3O75131 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CPNE3O75131 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CPNE3O75131 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.48■□□□□ 0.55
CPNE3O75131 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms