Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
COCHO43405 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.99■□□□□ 0.79
COCHO43405 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
COCHO43405 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.99■□□□□ 0.79
COCHO43405 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
COCHO43405 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
COCHO43405 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.99■□□□□ 0.79
COCHO43405 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
COCHO43405 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.99■□□□□ 0.79
COCHO43405 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.99■□□□□ 0.79
COCHO43405 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.99■□□□□ 0.79
COCHO43405 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.99■□□□□ 0.79
COCHO43405 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.99■□□□□ 0.79
COCHO43405 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COCHO43405 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.99■□□□□ 0.79
COCHO43405 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COCHO43405 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.98■□□□□ 0.79
COCHO43405 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.98■□□□□ 0.79
COCHO43405 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COCHO43405 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COCHO43405 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COCHO43405 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COCHO43405 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.98■□□□□ 0.79
COCHO43405 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.98■□□□□ 0.79
COCHO43405 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.98■□□□□ 0.79
COCHO43405 CCR12P-201ENST00000446203 998 ntBASIC19.98■□□□□ 0.79
COCHO43405 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.98■□□□□ 0.79
COCHO43405 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.98■□□□□ 0.79
COCHO43405 AL023803.3-201ENST00000615559 522 ntBASIC19.98■□□□□ 0.79
COCHO43405 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COCHO43405 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COCHO43405 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.98■□□□□ 0.79
COCHO43405 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COCHO43405 SDHAP1-207ENST00000440850 2000 ntBASIC19.98■□□□□ 0.79
COCHO43405 AC125437.2-201ENST00000625180 2167 ntBASIC19.98■□□□□ 0.79
COCHO43405 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.98■□□□□ 0.79
COCHO43405 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.98■□□□□ 0.79
COCHO43405 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COCHO43405 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.97■□□□□ 0.79
COCHO43405 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COCHO43405 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COCHO43405 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COCHO43405 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
COCHO43405 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COCHO43405 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.97■□□□□ 0.79
COCHO43405 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.97■□□□□ 0.79
COCHO43405 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COCHO43405 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.97■□□□□ 0.79
COCHO43405 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COCHO43405 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COCHO43405 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 AC092338.2-201ENST00000568827 1415 ntBASIC19.96■□□□□ 0.79
COCHO43405 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.96■□□□□ 0.79
COCHO43405 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
COCHO43405 AC007663.1-201ENST00000438948 1240 ntBASIC19.96■□□□□ 0.79
COCHO43405 PRSS44-201ENST00000515154 1146 ntBASIC19.96■□□□□ 0.79
COCHO43405 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
COCHO43405 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.96■□□□□ 0.79
COCHO43405 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.96■□□□□ 0.79
COCHO43405 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.96■□□□□ 0.79
COCHO43405 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
COCHO43405 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.95■□□□□ 0.79
COCHO43405 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.95■□□□□ 0.78
COCHO43405 TREX1-205ENST00000625293 1783 ntBASIC19.95■□□□□ 0.78
COCHO43405 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.95■□□□□ 0.78
COCHO43405 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.95■□□□□ 0.78
COCHO43405 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
COCHO43405 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.95■□□□□ 0.78
COCHO43405 LIN28AP1-201ENST00000429574 405 ntBASIC19.95■□□□□ 0.78
COCHO43405 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
COCHO43405 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.95■□□□□ 0.78
COCHO43405 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.95■□□□□ 0.78
COCHO43405 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.95■□□□□ 0.78
COCHO43405 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
COCHO43405 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.95■□□□□ 0.78
COCHO43405 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
COCHO43405 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.95■□□□□ 0.78
COCHO43405 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms