Protein–RNA interactions for Protein: O15212

PFDN6, Prefoldin subunit 6, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6O15212 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PFDN6O15212 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PFDN6O15212 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PFDN6O15212 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PFDN6O15212 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN6O15212 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.33■□□□□ 0.68
PFDN6O15212 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.33■□□□□ 0.68
PFDN6O15212 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN6O15212 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PFDN6O15212 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.33■□□□□ 0.68
PFDN6O15212 ZNF815P-204ENST00000434898 1737 ntBASIC19.33■□□□□ 0.68
PFDN6O15212 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN6O15212 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN6O15212 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PFDN6O15212 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
PFDN6O15212 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.32■□□□□ 0.68
PFDN6O15212 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
PFDN6O15212 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.32■□□□□ 0.68
PFDN6O15212 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.32■□□□□ 0.68
PFDN6O15212 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.32■□□□□ 0.68
PFDN6O15212 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
PFDN6O15212 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.32■□□□□ 0.68
PFDN6O15212 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.32■□□□□ 0.68
PFDN6O15212 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.32■□□□□ 0.68
PFDN6O15212 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PFDN6O15212 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.32■□□□□ 0.68
PFDN6O15212 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
PFDN6O15212 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
PFDN6O15212 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PFDN6O15212 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PFDN6O15212 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.31■□□□□ 0.68
PFDN6O15212 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.31■□□□□ 0.68
PFDN6O15212 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.31■□□□□ 0.68
PFDN6O15212 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.31■□□□□ 0.68
PFDN6O15212 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PFDN6O15212 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.31■□□□□ 0.68
PFDN6O15212 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.31■□□□□ 0.68
PFDN6O15212 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PFDN6O15212 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.31■□□□□ 0.68
PFDN6O15212 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.31■□□□□ 0.68
PFDN6O15212 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PFDN6O15212 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
PFDN6O15212 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PFDN6O15212 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.3■□□□□ 0.68
PFDN6O15212 AL032819.2-201ENST00000624543 2162 ntBASIC19.3■□□□□ 0.68
PFDN6O15212 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.3■□□□□ 0.68
PFDN6O15212 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 NBPF21P-201ENST00000425093 1451 ntBASIC19.3■□□□□ 0.68
PFDN6O15212 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PFDN6O15212 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.3■□□□□ 0.68
PFDN6O15212 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.3■□□□□ 0.68
PFDN6O15212 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 AC008403.3-201ENST00000598924 454 ntBASIC19.3■□□□□ 0.68
PFDN6O15212 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.3■□□□□ 0.68
PFDN6O15212 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.3■□□□□ 0.68
PFDN6O15212 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PFDN6O15212 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.3■□□□□ 0.68
PFDN6O15212 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PFDN6O15212 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PFDN6O15212 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms