Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.51■□□□□ 0.39
SMAD9O15198 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 KRT16P5-201ENST00000455284 522 ntBASIC17.51■□□□□ 0.39
SMAD9O15198 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.51■□□□□ 0.39
SMAD9O15198 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.51■□□□□ 0.39
SMAD9O15198 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
SMAD9O15198 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.51■□□□□ 0.39
SMAD9O15198 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.51■□□□□ 0.39
SMAD9O15198 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.51■□□□□ 0.39
SMAD9O15198 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.51■□□□□ 0.39
SMAD9O15198 AC066615.1-201ENST00000640911 628 ntBASIC17.51■□□□□ 0.39
SMAD9O15198 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SMAD9O15198 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMAD9O15198 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SMAD9O15198 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SMAD9O15198 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SMAD9O15198 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMAD9O15198 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SMAD9O15198 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.5■□□□□ 0.39
SMAD9O15198 UBE2SP1-201ENST00000450587 669 ntBASIC17.5■□□□□ 0.39
SMAD9O15198 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.5■□□□□ 0.39
SMAD9O15198 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.5■□□□□ 0.39
SMAD9O15198 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.5■□□□□ 0.39
SMAD9O15198 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.5■□□□□ 0.39
SMAD9O15198 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.5■□□□□ 0.39
SMAD9O15198 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.5■□□□□ 0.39
SMAD9O15198 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SMAD9O15198 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.5■□□□□ 0.39
SMAD9O15198 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.5■□□□□ 0.39
SMAD9O15198 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMAD9O15198 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SMAD9O15198 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.49■□□□□ 0.39
SMAD9O15198 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SMAD9O15198 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SMAD9O15198 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.49■□□□□ 0.39
SMAD9O15198 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMAD9O15198 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SMAD9O15198 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.49■□□□□ 0.39
SMAD9O15198 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.49■□□□□ 0.39
SMAD9O15198 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.49■□□□□ 0.39
SMAD9O15198 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SMAD9O15198 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.48■□□□□ 0.39
SMAD9O15198 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 AC125437.2-201ENST00000625180 2167 ntBASIC17.48■□□□□ 0.39
SMAD9O15198 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SMAD9O15198 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.48■□□□□ 0.39
SMAD9O15198 TUBB8P6-201ENST00000436895 1288 ntBASIC17.48■□□□□ 0.39
SMAD9O15198 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.48■□□□□ 0.39
SMAD9O15198 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.48■□□□□ 0.39
SMAD9O15198 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.48■□□□□ 0.39
SMAD9O15198 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.48■□□□□ 0.39
SMAD9O15198 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SMAD9O15198 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
SMAD9O15198 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SMAD9O15198 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms