Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ATP2A1O14983 COX11P1-201ENST00000489116 835 ntBASIC22.12■■□□□ 1.13
ATP2A1O14983 YBX1P2-201ENST00000489612 999 ntBASIC22.12■■□□□ 1.13
ATP2A1O14983 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC22.12■■□□□ 1.13
ATP2A1O14983 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
ATP2A1O14983 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.12■■□□□ 1.13
ATP2A1O14983 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.12■■□□□ 1.13
ATP2A1O14983 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
ATP2A1O14983 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.12■■□□□ 1.13
ATP2A1O14983 KRT8P11-201ENST00000409686 1436 ntBASIC22.12■■□□□ 1.13
ATP2A1O14983 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC22.12■■□□□ 1.13
ATP2A1O14983 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.12■■□□□ 1.13
ATP2A1O14983 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
ATP2A1O14983 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.12■■□□□ 1.13
ATP2A1O14983 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP2A1O14983 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP2A1O14983 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP2A1O14983 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC22.11■■□□□ 1.13
ATP2A1O14983 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP2A1O14983 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.11■■□□□ 1.13
ATP2A1O14983 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP2A1O14983 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC22.11■■□□□ 1.13
ATP2A1O14983 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.11■■□□□ 1.13
ATP2A1O14983 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC22.11■■□□□ 1.13
ATP2A1O14983 AC087388.1-201ENST00000571370 1112 ntBASIC22.11■■□□□ 1.13
ATP2A1O14983 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
ATP2A1O14983 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ATP2A1O14983 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC22.11■■□□□ 1.13
ATP2A1O14983 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ATP2A1O14983 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ATP2A1O14983 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
ATP2A1O14983 AL391422.3-201ENST00000603791 2761 ntBASIC22.1■■□□□ 1.13
ATP2A1O14983 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP2A1O14983 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP2A1O14983 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP2A1O14983 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC22.1■■□□□ 1.13
ATP2A1O14983 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
ATP2A1O14983 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
ATP2A1O14983 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC22.1■■□□□ 1.13
ATP2A1O14983 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.1■■□□□ 1.13
ATP2A1O14983 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
ATP2A1O14983 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
ATP2A1O14983 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.1■■□□□ 1.13
ATP2A1O14983 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
ATP2A1O14983 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
ATP2A1O14983 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ATP2A1O14983 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
ATP2A1O14983 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC22.09■■□□□ 1.13
ATP2A1O14983 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC22.09■■□□□ 1.13
ATP2A1O14983 TSPY5P-201ENST00000426936 936 ntBASIC22.09■■□□□ 1.13
ATP2A1O14983 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC22.09■■□□□ 1.13
ATP2A1O14983 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ATP2A1O14983 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.09■■□□□ 1.13
ATP2A1O14983 AP003041.3-201ENST00000527151 707 ntBASIC22.09■■□□□ 1.13
ATP2A1O14983 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.09■■□□□ 1.13
ATP2A1O14983 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.09■■□□□ 1.13
ATP2A1O14983 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ATP2A1O14983 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
ATP2A1O14983 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC22.09■■□□□ 1.13
ATP2A1O14983 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ATP2A1O14983 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
ATP2A1O14983 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP2A1O14983 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP2A1O14983 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP2A1O14983 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC22.08■■□□□ 1.13
ATP2A1O14983 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
ATP2A1O14983 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
ATP2A1O14983 CD70-202ENST00000423145 881 ntTSL 2 BASIC22.08■■□□□ 1.13
ATP2A1O14983 SAPCD2P2-201ENST00000431719 1174 ntBASIC22.08■■□□□ 1.13
ATP2A1O14983 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.08■■□□□ 1.13
ATP2A1O14983 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
ATP2A1O14983 AL031432.5-201ENST00000641059 760 ntBASIC22.08■■□□□ 1.13
ATP2A1O14983 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
ATP2A1O14983 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
ATP2A1O14983 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.12
ATP2A1O14983 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
ATP2A1O14983 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC22.07■■□□□ 1.12
ATP2A1O14983 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP2A1O14983 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP2A1O14983 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP2A1O14983 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ATP2A1O14983 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
ATP2A1O14983 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.07■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms