Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLDN4O14493 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN4O14493 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN4O14493 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN4O14493 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN4O14493 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN4O14493 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN4O14493 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLDN4O14493 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN4O14493 FAM197Y1-201ENST00000421178 764 ntBASIC18.21■□□□□ 0.51
CLDN4O14493 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN4O14493 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.21■□□□□ 0.51
CLDN4O14493 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.21■□□□□ 0.51
CLDN4O14493 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN4O14493 AC113410.3-201ENST00000623366 203 ntBASIC18.21■□□□□ 0.51
CLDN4O14493 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN4O14493 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN4O14493 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.21■□□□□ 0.51
CLDN4O14493 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLDN4O14493 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN4O14493 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLDN4O14493 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CLDN4O14493 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 ZNF815P-204ENST00000434898 1737 ntBASIC18.2■□□□□ 0.5
CLDN4O14493 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN4O14493 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN4O14493 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN4O14493 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.2■□□□□ 0.5
CLDN4O14493 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN4O14493 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CLDN4O14493 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CLDN4O14493 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.2■□□□□ 0.5
CLDN4O14493 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.2■□□□□ 0.5
CLDN4O14493 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.2■□□□□ 0.5
CLDN4O14493 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.2■□□□□ 0.5
CLDN4O14493 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CLDN4O14493 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
CLDN4O14493 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.2■□□□□ 0.5
CLDN4O14493 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CLDN4O14493 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLDN4O14493 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN4O14493 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CLDN4O14493 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.19■□□□□ 0.5
CLDN4O14493 AL355355.2-201ENST00000442321 338 ntBASIC18.19■□□□□ 0.5
CLDN4O14493 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN4O14493 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN4O14493 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.19■□□□□ 0.5
CLDN4O14493 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.19■□□□□ 0.5
CLDN4O14493 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.19■□□□□ 0.5
CLDN4O14493 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CLDN4O14493 KRT17P2-201ENST00000300992 1314 ntBASIC18.19■□□□□ 0.5
CLDN4O14493 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
CLDN4O14493 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CLDN4O14493 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CLDN4O14493 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.18■□□□□ 0.5
CLDN4O14493 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CLDN4O14493 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CLDN4O14493 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.18■□□□□ 0.5
CLDN4O14493 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.18■□□□□ 0.5
CLDN4O14493 AC026271.3-201ENST00000571884 352 ntBASIC18.18■□□□□ 0.5
CLDN4O14493 MIR4785-201ENST00000585005 73 ntBASIC18.18■□□□□ 0.5
CLDN4O14493 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CLDN4O14493 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms