Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.17■□□□□ 0.02
PCP4L1A6NKN8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 LINC01960-201ENST00000563759 1884 ntBASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PCP4L1A6NKN8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 AC012317.2-201ENST00000623305 2251 ntBASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCP4L1A6NKN8 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
PCP4L1A6NKN8 EFTUD1P1-204ENST00000560401 1798 ntBASIC15.13■□□□□ 0.01
PCP4L1A6NKN8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCP4L1A6NKN8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PCP4L1A6NKN8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
PCP4L1A6NKN8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms