Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 AC027682.1-201ENST00000562846 899 ntBASIC13.73□□□□□ -0.21
LINC01549A6NIU2 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LINC01549A6NIU2 AC012313.1-201ENST00000593393 3059 ntBASIC13.72□□□□□ -0.21
LINC01549A6NIU2 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 PTBP1P-201ENST00000554374 1601 ntBASIC13.72□□□□□ -0.21
LINC01549A6NIU2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 TPRG1LP1-201ENST00000598702 760 ntBASIC13.72□□□□□ -0.21
LINC01549A6NIU2 AL354811.1-201ENST00000610286 706 ntBASIC13.72□□□□□ -0.21
LINC01549A6NIU2 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 RBM17P2-201ENST00000616397 1405 ntBASIC13.72□□□□□ -0.21
LINC01549A6NIU2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.72□□□□□ -0.21
LINC01549A6NIU2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.71□□□□□ -0.21
LINC01549A6NIU2 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms