Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TBC1D3BA6NDS4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 YBX1P2-201ENST00000489612 999 ntBASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 AC141257.4-201ENST00000634557 245 ntBASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 AC136944.6-201ENST00000634818 245 ntBASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.61■□□□□ 0.73
TBC1D3BA6NDS4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 TSPY5P-201ENST00000426936 936 ntBASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 AC099778.1-201ENST00000568593 1911 ntBASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TBC1D3BA6NDS4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 AC092647.4-201ENST00000457211 535 ntBASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TBC1D3BA6NDS4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TBC1D3BA6NDS4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TBC1D3BA6NDS4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
TBC1D3BA6NDS4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TBC1D3BA6NDS4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 AC140113.3-201ENST00000605663 199 ntBASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
TBC1D3BA6NDS4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms