Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRIT2A6NDA9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 RPS2P55-201ENST00000397318 883 ntBASIC18.36■□□□□ 0.53
LRIT2A6NDA9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 AC107956.1-201ENST00000494359 873 ntBASIC18.36■□□□□ 0.53
LRIT2A6NDA9 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 AC073195.1-201ENST00000607241 877 ntBASIC18.36■□□□□ 0.53
LRIT2A6NDA9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRIT2A6NDA9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 KRT16P1-201ENST00000399124 1418 ntBASIC18.35■□□□□ 0.53
LRIT2A6NDA9 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 AC004980.1-204ENST00000429707 299 ntBASIC18.35■□□□□ 0.53
LRIT2A6NDA9 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.35■□□□□ 0.53
LRIT2A6NDA9 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 AC131212.4-201ENST00000623606 975 ntBASIC18.35■□□□□ 0.53
LRIT2A6NDA9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.35■□□□□ 0.53
LRIT2A6NDA9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 TEX21P-204ENST00000641479 1693 ntBASIC18.34■□□□□ 0.53
LRIT2A6NDA9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.34■□□□□ 0.53
LRIT2A6NDA9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 AC233702.5-201ENST00000584107 538 ntBASIC18.34■□□□□ 0.53
LRIT2A6NDA9 CR392000.1-201ENST00000624770 1228 ntBASIC18.34■□□□□ 0.53
LRIT2A6NDA9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRIT2A6NDA9 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms