Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 AC010536.3-201ENST00000620306 533 ntBASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.1■□□□□ 0.49
TCRBV3S1A0A5B6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 KRT18P68-201ENST00000392293 1000 ntBASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 AC104417.2-201ENST00000562989 1793 ntBASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TCRBV3S1A0A5B6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV3S1A0A5B6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
TCRBV3S1A0A5B6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV3S1A0A5B6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TCRBV3S1A0A5B6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TCRBV3S1A0A5B6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 KRT19P1-201ENST00000405746 1186 ntBASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TCRBV3S1A0A5B6 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 AC020763.4-201ENST00000623414 4170 ntBASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 RARRES2P4-201ENST00000514074 484 ntBASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 TFP1-202ENST00000475455 1573 ntBASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.07■□□□□ 0.48
TCRBV3S1A0A5B6 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.06■□□□□ 0.48
TCRBV3S1A0A5B6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms